| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0833 |
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| Symbol | |
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| ID | 3569648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 904633 |
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| End bp | 906573 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637679289 |
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| Product | GAF:ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase, dimerization and phosphoacceptor region |
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| Protein accession | YP_284059 |
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| Protein GI | 71906472 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0228489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCCA CCTCAGGCAA ACTCTCGCGA AAAATCATTG GCGTACTGGT CGTGTTTTTT
CTCGTTGCGA CCTCTGCCAT TGGTTTGACC CTGCTCATTT CCTGGCAACT GGAAGGGGTG
GCTGCGGCGA TCAATGACGC GGGCAGCCAG CGCATGCGGA CCTACCGTTT AGGCCACTTG
ATGGCCCGCG GCCTCGAAGC AGAAACGCAG GTTGCCGCGT TGACTGCCGC CTTGAGCGAA
GAAGTCGTGC GTTTCGACAA GGTGCAGCGT GACCTGCAAT TGGGCGATCC GCTCAGGCCG
CTGTCTTCGC CCCGGAATTT CGAAGTGCAG GACAGGCTGC ATGACGTCGA ACAGTCGTGG
CGGAGGATCA TTCGGCCGCT GGTGGAAAGT TATCTGGCCG GTGATCACCA GGCGCGCTCG
GAGGTGCTTG ATCGCTTCGA TCTCGAACTG GAACCGTCCG TCATGGGAAT TAACGAATTG
GTGTTGGCCA TGGAGCGCAG CTATGCCTAC GACACCAATC TGTTGCGCTA TGTCCAGGTG
GCGCTGGTGT TGCTGGCGAT CTTTGGTACG GTCATCCTGA TCCGGTTTTT TGAGCAGCTG
GTTATCCGGC CGGTTAGCCT GCTGCATGTC GGCATGCGGC GCATGACCGG AAACGATTTG
ACGGTGCGCG TCCCGGTGAC CAGCGACGAT GAACTGGGCG GGCTTGCCGC AGGTTTCAAC
CAGATGGCCG AGCATCTGGA GGATGCTTAC GGCTCACTGG AACAGCGTAT CGAGGCCGAA
ACACGACGTC TCGCCCAGCG CAATCACGAA CTCGGTATTT TGTATGCGGC GACTTCGTTT
CTCAGTGAAC CCGCACCACT GGAGGCCCTG TGCGAGGGTT TTCTTGATCA CATCAAGAAC
GCGCTGGGGG CTGACGCCGG TGCGGTGCGA CTGTATGTGC CGCAGACGGA CAAGCTCTAC
CTGATGACCC ACGAAGGGCT TTCAGACGAG TTTGTCGCCA ACGAAGGCCA GCTGAATTGC
GGCGAATGCC TGTGCGGCGA GGTGTTTCAG AGCAGCCGGC CGGCCGCCTT TGCAACCGCC
AATCCACCGG AGGGCATGCG CCTCCGGAGC TGCATTCGTG AAGGATTTGC GACGGCAACG
GCGTTCAGCA TCCTCTACGA CAAGCAGCGA CTTGGCGTCT ACAACCTCTA TTTCCGCCGT
TCCCAAGCCT TGTCCGAGCA GGAAATCCAC TTGCTTGAAA CGCTTGGCCA TCACCTCGGT
GTAGCGATTG AGAACCAGCG CCTGAAGTCC CGCGAAAAGG AGTTGGCCGT TTCCGAGGAG
CGCAACCTGC TGGCTCAGGA ACTGCACGAT TCGATTGCCC AAGGCCTGGC TTTCCTGAAT
ATCCAGGTCC AGCTGCTGCA GGATTCGCTG CGCAAGGGCA AGGCTGATGA GGCCATGCAG
ACGGCCGGGC AATTGCGCGA AGGTGTTCAG GAGAGTTATG ACGATGTTCG CGAGTTGCTG
GTGCATTTCC GGACGCGCGT CCATCAGTCC GATCTCGATT CGGCGATCAA TGCCGCGCTC
GAAAAGTTCG AAGGGCAAAC CGGCATCCAG ACCGAGTTTG AACGGATTGG AGCGACAACG
CCGTTGCCGC CCACGGACGA AATCCAGATC ATGCATATCG TGCAAGAGTC CTTGTCCAAT
ATTCGCAAGC ATGCCAAGGC AAAGCGTGTG CGGGTCACTG TGCGTCAGGA GCTTGGTACC
AGCAAAGTCA TGGTTGAAGA TGACGGTATC GGCTTCGACC CGCAAAACGA TCCGAATTGC
CTGTCCGATC GCCATGTCGG TCTGAAAATC ATGCGGGAGC GAGCCCATCG CATCGGTGGT
GAGTGCCGAA TAACATCAAA TCCAGGCCAA GGCTCGTGCG TTATATTGAG CCTGCCGAAG
GAAAATAGGG GGAGTGTCTG A
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| Protein sequence | MFATSGKLSR KIIGVLVVFF LVATSAIGLT LLISWQLEGV AAAINDAGSQ RMRTYRLGHL
MARGLEAETQ VAALTAALSE EVVRFDKVQR DLQLGDPLRP LSSPRNFEVQ DRLHDVEQSW
RRIIRPLVES YLAGDHQARS EVLDRFDLEL EPSVMGINEL VLAMERSYAY DTNLLRYVQV
ALVLLAIFGT VILIRFFEQL VIRPVSLLHV GMRRMTGNDL TVRVPVTSDD ELGGLAAGFN
QMAEHLEDAY GSLEQRIEAE TRRLAQRNHE LGILYAATSF LSEPAPLEAL CEGFLDHIKN
ALGADAGAVR LYVPQTDKLY LMTHEGLSDE FVANEGQLNC GECLCGEVFQ SSRPAAFATA
NPPEGMRLRS CIREGFATAT AFSILYDKQR LGVYNLYFRR SQALSEQEIH LLETLGHHLG
VAIENQRLKS REKELAVSEE RNLLAQELHD SIAQGLAFLN IQVQLLQDSL RKGKADEAMQ
TAGQLREGVQ ESYDDVRELL VHFRTRVHQS DLDSAINAAL EKFEGQTGIQ TEFERIGATT
PLPPTDEIQI MHIVQESLSN IRKHAKAKRV RVTVRQELGT SKVMVEDDGI GFDPQNDPNC
LSDRHVGLKI MRERAHRIGG ECRITSNPGQ GSCVILSLPK ENRGSV
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