| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0826 |
|---|
| Symbol | |
|---|
| ID | 3569451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 897130 |
|---|
| End bp | 898818 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637679282 |
|---|
| Product | protein kinase:protein phosphatase 2C-like |
|---|
| Protein accession | YP_284052 |
|---|
| Protein GI | 71906465 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase
[COG0631] Serine/threonine protein phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.025129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTGC AAGTTGCCCT TGGATACGCT TCATTGACCG GACCGCGCGA GCGGAACGAG
GATTTTTGCG GTGTTGCGAC GCCGGAAGGT CAGGACCTCG ACAACAAGGG CGTCATTGCA
GCAGTGGCTG ACGGGATCGG TGGCCACAAG GGCGGACGCG AGGCCGCTGA ATACACGGTG
CGCGGTCTGC TCGCCGACTA TTTCGCAACG CCGGATACCT GGAGTGTGCC GCGCGCCATC
GAGACAGTTT CGACGGCGTT GAATCGCTGG GTCATCGCCG AGGGCAGCCG CAATGCAGAG
CTGGCCGGCA TGGCGACGAC GCTGTCGGTC GTCGTCCTGC GTGGCCGTCG TTTCTACACG
GCACATATCG GCGATTCGCG CATCTACCGT TTTCAGGAAG GGCGACTGCA TCAGCTGACC
GTCGATCACA CCTGGGAACA CCCGGAACTG AACAACGTGC TGTCGCGGGC CATCGGCCTC
GATCCGCGCG TGCTGATGGA TTTCGCTGAT GGCGAACTGG CGCTCAACGA CCGTTTCTTG
CTGATTTCCG ATGGCGTCTG GGGTGTGCTG CCGGATGCCC TGATCGCCGA TGTGCTGCTC
GATCACCCGG AACCTCAGGG GGCAGCGGCG GCATTGACCA GTCTGGCCAT TGCCCACGGC
GGGCACGACA ACGCCAGCGC GGTGGTCGTC GATGTGCTGG CCCTGCCGCC GGCCAATCTG
CGCGATAGCC TGGAGGGGGC GGCCAGTCTG CCTTTGCCGC ACCGCATGAA GCCCGGCCAT
GAACTGGATG GGCTGGTCGT CGAGGATATC CTGCATGATT CCCGGGAGAC CCTGCTGTAT
CGCGTCAGCA ATCCGCGTAA CGGCCAGCAA CTGGTCCTCA AGACGCTACA GCCGGGCATG
GAGGGTGATC CCGAGGCCAC GGCAGCGCTG CTGATGGAGG AGTGGCGTGC CCGCCGCGTG
GTTTCGCCCT TCTTCCCTCA GGTCGTGCCG GCCGAGCAGC GCAGTTGCCT GTATTACCTG
ATGACCTGGC ATGCCGGGGC GACCCTGCAA GTCCGTCTCG ATGGCGACCA GCATTTCCCT
GTCGGTGAGG TGGTGCGCCA TGGTGTTGCG CTGCTCAAGG CCATCGCCAG CCTGCATCGG
CTCGATATCG TGCATCGCGA CATCAAGCCC GACAACATTC ACCTCGGGCA GGATGGCGTG
CTGCGCATCC TCGATCTCGG GGTGGCCGTC AGCCTGGCCG AACGCAAGGC CGGCGATCCG
ATCGGCCAGG CCGGCACGCC TTCATATATG GCCCCGGAAC TGTTCGAGAA CCCGGAGCCG
CAAGCGGGCT ACGACCTCTA CGCCGCCGGG GTCACGCTCT ACCATCTGCT GACCCGTAAA
TACCCCTACG GTGAAATCGA ACCCTTCCAG ACGCCAAAAT TCGGCGAGCC GACGCGACCA
ACGCGCTGGC GGCCGGAAAT CCCCGGCTGG CTGGAGAACA TCCTGCTCAA GGCCGTGGCC
AAGGAGGCCA AGGACCGTTT CGAAACGGCC GAGGAGTTCC TGCTCGCCCT GGAGCGCGGT
GCTGCCCGGC CCATTGCGGC ACCCAGCCGG CAGCCGCTGG TCCAGCGCAA TCCGCTGCAA
TTCTGGAAAG GCGTTGCGGC CATCTCGCTC GCCATCAACC TGATTTTGTT ACTGAAGCTG
TTGCGATAG
|
|---|
| Protein sequence | MPLQVALGYA SLTGPRERNE DFCGVATPEG QDLDNKGVIA AVADGIGGHK GGREAAEYTV
RGLLADYFAT PDTWSVPRAI ETVSTALNRW VIAEGSRNAE LAGMATTLSV VVLRGRRFYT
AHIGDSRIYR FQEGRLHQLT VDHTWEHPEL NNVLSRAIGL DPRVLMDFAD GELALNDRFL
LISDGVWGVL PDALIADVLL DHPEPQGAAA ALTSLAIAHG GHDNASAVVV DVLALPPANL
RDSLEGAASL PLPHRMKPGH ELDGLVVEDI LHDSRETLLY RVSNPRNGQQ LVLKTLQPGM
EGDPEATAAL LMEEWRARRV VSPFFPQVVP AEQRSCLYYL MTWHAGATLQ VRLDGDQHFP
VGEVVRHGVA LLKAIASLHR LDIVHRDIKP DNIHLGQDGV LRILDLGVAV SLAERKAGDP
IGQAGTPSYM APELFENPEP QAGYDLYAAG VTLYHLLTRK YPYGEIEPFQ TPKFGEPTRP
TRWRPEIPGW LENILLKAVA KEAKDRFETA EEFLLALERG AARPIAAPSR QPLVQRNPLQ
FWKGVAAISL AINLILLLKL LR
|
|---|
| |