Gene Daro_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0819 
Symbol 
ID3569444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp889938 
End bp890750 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content57% 
IMG OID637679275 
Productformate/nitrite transporter 
Protein accessionYP_284045 
Protein GI71906458 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value0.225898 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0203602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACC TGGTACCTTC AGAATTCGTC ACCAAAATGG TGGATGCGGG CGAATCAAAA 
ATCTACATGT CCACCCGTGA CTCGTTGATC CGCGCCTATA TGGCCGGTGC CATCCTCGCG
CTGGCGGCTG TGTTCGCCGT AACGGCCTCG GTCATGACCG GTCAGGCGCT GGTCGGCGCC
ATCCTCTTCC CGGTTGGCTT CTGCATGCTT TACCTGCTGG GTTTTGACCT GCTCACCGGC
GTCTTCGTTT TGACGCCCCT GGCCTGGCTC GACAAGCGTC CGGGCGTGAC CATCAAGGGA
ATTTTGAGAA ACTGGGGTGT TGTCTTTACC GGCAATTTCC TCGGTGCGCT GACCGTTGCC
TTCCTGATGG CCTTTGTCTT CACCTACGGT TTCTCGACCG CGCCTAATGA AATCGGCACC
AAGATTGGCC ATATTGGCGA AGCACGTACC ATCGGCTACG CCAAGTATGG CCTGATGGGC
TGGCTGACCA TTTTCATCCG CGGCATGCTG TGCAACTGGA TGGTGTCCAC CGGTGTTGTC
GGTGCCATGA TCTCGACCAC GGTCAGCGGC AAGGTCATCG CCATGTGGAT GCCGATCATG
CTGTTCTTCG CGATGACCTT CGAGCACTCC GTGGTCAACA TGTTCCTGTT TCCGTCCGGC
CTGATGATGG GCGGCAACTT CTCCATCCTC GACTACTTCA TCTGGAACGA AATCCCGGTG
GTTCTCGGTA ACCTCATCGG TGGTCTGGCT TTCACCGGCC TGACCCTGTA CGCCACGCAC
ATCAAGACTG GCCCGAAGCG CAGCTTCAAC TAA
 
Protein sequence
MAYLVPSEFV TKMVDAGESK IYMSTRDSLI RAYMAGAILA LAAVFAVTAS VMTGQALVGA 
ILFPVGFCML YLLGFDLLTG VFVLTPLAWL DKRPGVTIKG ILRNWGVVFT GNFLGALTVA
FLMAFVFTYG FSTAPNEIGT KIGHIGEART IGYAKYGLMG WLTIFIRGML CNWMVSTGVV
GAMISTTVSG KVIAMWMPIM LFFAMTFEHS VVNMFLFPSG LMMGGNFSIL DYFIWNEIPV
VLGNLIGGLA FTGLTLYATH IKTGPKRSFN