| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0804 |
|---|
| Symbol | |
|---|
| ID | 3569402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 868644 |
|---|
| End bp | 869444 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637679254 |
|---|
| Product | regulatory proteins, IclR |
|---|
| Protein accession | YP_284030 |
|---|
| Protein GI | 71906443 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000000000000542062 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000637978 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACTA AAGTTGCGAG CGATCGCCAG GGAATTCAGT CTGTCGAGGT AGGGTTTCGC
CTGTTACGCG TACTGGCAGC CACCAATCGT CCGATGATGC TGCGTGATAT CGCCAAGGGA
GCAGGAATGC CCGCAGCCAA AGCTCATCGT TACATGGTGA GCTTTCTGCG TATCGGCATT
GTTGAACAGG ACGCCAGCAG CGGTCGCTAC GACCTAGGCG CCTACGCATT GGAGCTTGGC
TTATCAGGGT TAGGGCGACT AGATCCAGTC CGCTTATCCG GCCCTATCCT TGAAGCCCTA
TGTGAAGAAA TTCACGAGAC CGTCGCACTT GCAGTTTGGG GGACCCATGG CGCAACCATT
GTGCGAATTG TTGACCCCGG CGGCCCCATC ACTATCACCT TACGCCCAGG AACAACGCTG
CCACTGTGTA ACTCAGCCAC TGGACGAGCG TTTGCCACCT TTTATCGCTC ACCCTTTCTC
AAGAAAATGC TGGATGACGA ACTGAAAGAA ATATCAGAAT CCAGCAAAAC AGCCGTCACG
ACCATTCGCC GACAACTGGA AAAAAACCTG ACTGAAATTC GCTCCCACGG CATTGCGCGC
GCCACCGGAA GCCTAACACC TGGCATCAAC GGCTTTAGCG CCCCTGTGTA CGATCACACA
GGAAGCATGG TCGCTGCGAT TACCTCGCTC GGATCAATGG GGGAATTCGA TGTGGAATGG
GAAAGCCCTG TAGCCAAGGC GATGCTGGCA GCTTCGATAA GCCTGTCACA CCGCCTAGGC
TACGGCAGCA TGGCCGAATA A
|
|---|
| Protein sequence | MATKVASDRQ GIQSVEVGFR LLRVLAATNR PMMLRDIAKG AGMPAAKAHR YMVSFLRIGI
VEQDASSGRY DLGAYALELG LSGLGRLDPV RLSGPILEAL CEEIHETVAL AVWGTHGATI
VRIVDPGGPI TITLRPGTTL PLCNSATGRA FATFYRSPFL KKMLDDELKE ISESSKTAVT
TIRRQLEKNL TEIRSHGIAR ATGSLTPGIN GFSAPVYDHT GSMVAAITSL GSMGEFDVEW
ESPVAKAMLA ASISLSHRLG YGSMAE
|
|---|
| |