| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0788 |
|---|
| Symbol | |
|---|
| ID | 3569288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 856014 |
|---|
| End bp | 857393 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637679238 |
|---|
| Product | Phage integrase |
|---|
| Protein accession | YP_284014 |
|---|
| Protein GI | 71906427 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00333636 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCG TCATCGAGCC TCATCTAATG GTCAAGATCA AGTATGTATT CCAGCGCGGG
GATACCTATT ACTGGCAGCG AAGGATACCC AAGGATTTAG CCGAGAGATA CCCCTCATCA
GGCCCCTTGA AGATAAACCT TCAGACATCA GACCCTCGGG TTATTGCGTC CAAGGTTTCG
AAGCTGAACC GTCAGCATGA GGCCCTCTGG GCTGCCATGC GTAAAGACCA CAATCTTACC
CCTCAGTCTG CAAGGGAGGC AGCTTTAAGC ATCCTCAAGC AGCACGGGCT ATCGGTGCGA
GGGCAGCCCA ACGATGAGCT GGCTCTGTCT CTGTTCTACG ATAGGCTAGA CAGGAAGCGT
GAGGACTATG CCGCTACTCA GCCAGAGCCG GAAGAGGCAT ACCGCTATGG GGACCCTTCA
GAGTACCTAT CAAAGTCTGA GCTAGAAGCC TCCAGACTCC TGGAGGGGGT TGAGCATTTT
CTTATGTCGG ATGCCCTGGA GGTCTATCTG GCGGAGCATG TAAAGCGGGG TAAGCCCGGC
TTTGATAAGT TGGAGACATA CACCCGTAGA GCGTTTTCAA AGCTGACTGA GTTACTTGGT
GACAAGATAC TCAAGGAGGT TAGCCGGGAC GATGCTAAGG CCTTTAGAGA CAAGCTGCTG
GCTACTCTGA AGACTGAATC AGTGAAGCGA AATATCAACG TGATTAAGGC TGTATTCAAG
TCTGCCATTG TTGAGAAGGA GCTTAATATC CCCAATGTCT GGGACAGCCT GAAGATTGCA
GGCCTTGGAG AGGACTCAGA GGATAGAGAG CCGCTCAGTC ATGAAAGCCT GGAGAAGATG
CGCGGCCTGT GCAGGGCCAA GGATGACGAC ATGCGCTGGG CTCTATCCAT TCAGGGAGAG
ACAGGAGCGC GTCTTGCAGA GGTGGTGGGG GCGGGCTTGG ATGACATCCA TATTGCCGGG
GAGGAGGTCC CTTACCTGGA CATCAGGCCA CGCCCTTGGA GGACACTAAA GAATCCAGCC
ACAAGCACCC GTAAGGTGCC TCTGGTAGGT GACGCCTTAT GGGCTGCTGG CAGGCTCTTG
GAGGTGGCAG AGAAGGGCCA GAAGTATGCC TTCCCTCGCT ATGTCAAGGA TGACCAATGC
AAGGCGGACA GCGCCTCAGC AACCCTCAAT AAATGGCTTC TTGCTTCAGG TATTGACCAC
ACTACTCATG AGCTACGCCA CACGATGCGG GATAGGCTTC GTAATACTGG AGCGACTAGA
GACATCCAGG ATGCGGTAGG TGGGTGGGGA AAGAGCGAGA TAGCAGACAA CTACGGGCTG
GGGTATGCCT TGAAGATGCT CCAGGATGCC TTGCTCAAGA CACTTCCTGT TAAGTCTTAG
|
|---|
| Protein sequence | MHIVIEPHLM VKIKYVFQRG DTYYWQRRIP KDLAERYPSS GPLKINLQTS DPRVIASKVS
KLNRQHEALW AAMRKDHNLT PQSAREAALS ILKQHGLSVR GQPNDELALS LFYDRLDRKR
EDYAATQPEP EEAYRYGDPS EYLSKSELEA SRLLEGVEHF LMSDALEVYL AEHVKRGKPG
FDKLETYTRR AFSKLTELLG DKILKEVSRD DAKAFRDKLL ATLKTESVKR NINVIKAVFK
SAIVEKELNI PNVWDSLKIA GLGEDSEDRE PLSHESLEKM RGLCRAKDDD MRWALSIQGE
TGARLAEVVG AGLDDIHIAG EEVPYLDIRP RPWRTLKNPA TSTRKVPLVG DALWAAGRLL
EVAEKGQKYA FPRYVKDDQC KADSASATLN KWLLASGIDH TTHELRHTMR DRLRNTGATR
DIQDAVGGWG KSEIADNYGL GYALKMLQDA LLKTLPVKS
|
|---|
| |