| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0777 |
|---|
| Symbol | |
|---|
| ID | 3569276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 844716 |
|---|
| End bp | 845510 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637679226 |
|---|
| Product | YcgR |
|---|
| Protein accession | YP_284003 |
|---|
| Protein GI | 71906416 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG5581] Predicted glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 69 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.101382 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCA CCCAAGAAGA TCAGCCTAAC CCGGATTTCG AGATTGACCA TCCGGAAGCA
TATTCCCAAT ATTTCCTGAC CGCCCCGAGG GAGATTTCTT TCTATCTCAA TCTTCTGGTC
AAACGCGGCA GCCTGCTTAC GGCGCATATC GACGACGGGA AAGCGTTCTT CCTGACCACC
ATGATTGCGG TCGATGATGA AAAACAGGCT ATTTTTCTGG ATTCAGCGCA AGCGGATGAA
CTCAACACCG CTGCCAAAAA TGCTCACCGC ATTACCCTGA CAGCCAAACT AGACCGCGTC
AAGATTCAAC TCCGCCTCCC GCCCCTGAGA CACCAACTCG TTGACGGACA AAAAATGCTG
GTCGCGGCCT TCCCTCAGGC AATCCTGCGC ATTCAGCGAC GGGAGTTTTT CCGTTTAGAG
TCGTCATCAG CCCATCCTAT CCTTTGTCGG ATTGCCATGG AGGCCCCGGA AGGCACACTG
AAGACATTTG AATGGAATGT GGCCGACATC AGCGGCGGCG GGCTCAGCCT GAATGCTCCA
ACCAGCCTGA TTAACGACTG CCAACGCGAT GCACTGTTCA AGAACAGTCG GCTGGATATT
CCCGGCGAGG GCGTCTTGCT GGTCAATCTG CGCGTCCGGA AAACATCGGA GTTTTCTGCC
GAAAACGGAC AACATTACCT GCGGGTTGGC TGTGAATTCG TAGAACTACC GGGTTCCCGG
CTGGCAATGA TCGAACGCTA CATCGCCCGC ATCGAACGCG AGCGCAAGGC CCGCGACTCT
GGACTAGCGA ATTAA
|
|---|
| Protein sequence | MSSTQEDQPN PDFEIDHPEA YSQYFLTAPR EISFYLNLLV KRGSLLTAHI DDGKAFFLTT
MIAVDDEKQA IFLDSAQADE LNTAAKNAHR ITLTAKLDRV KIQLRLPPLR HQLVDGQKML
VAAFPQAILR IQRREFFRLE SSSAHPILCR IAMEAPEGTL KTFEWNVADI SGGGLSLNAP
TSLINDCQRD ALFKNSRLDI PGEGVLLVNL RVRKTSEFSA ENGQHYLRVG CEFVELPGSR
LAMIERYIAR IERERKARDS GLAN
|
|---|
| |