Gene Daro_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0688 
Symbol 
ID3568981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp758609 
End bp759778 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content51% 
IMG OID637679136 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_283914 
Protein GI71906327 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATA CTCAGACTAA ACTTTCTAAA ACCTTCAGCA ATTTCTTCGC ATCAGAGAAA 
ACCAGCGGCA TTTTGTTGAT TCTCTGCACA ATCCTGTCGC TTAGCATTGC CAATTCGCTT
GCAGGTCCTG CTTATCAGGG CTTCTGGCAT GCCATTGTTG CTGGTTTAAG CATTGAGCAC
TGGGTTAACG ATGCGCTGAT GGCTGTGTTC TTCCTGTTTG TCGGCTTGGA ACTGGAGCGC
GAACTGTACA ACGGCGAGCT TTCAAATTTC AGGAATGCCT TGCTGCCAAT CTTTGCCGCA
ATCGGCGGCA TTGGGGTGCC AGCATTGATA CATTACACAC TGAACGTTGG CACGCCGACT
CAAGCCGGAA CTGGTATTCC GATGGCAACT GATATTGCCT TTGCGCTCGG CGTGCTGGCG
CTGTTGGGGA GTCGGGTTCC CGCATCGCTG AAGGTGTTCT TGACTGCGCT CGCAGTGATG
GACGACTTGG GTGCGATCAT CGTGATCGCC ATGTTCTATA CCCAGCAGTT TTCCTTGGTC
TATCTGCTAA GTGCGCTGGC GGTGTTCGGC CTACTGCTGG TGCTCAATCG AATATTCCGG
GTGATGTCGC TGCTTCCCTA CCTGCTTGGC GGCGCGTTGA TGTGGTTTTT GATGCTCAAG
TCCGGTGTTC ATGCAACGAT TGCCGGCGTA CTGCTTGCGT TTGCCATTCC TTTTTCCGCC
AAAGCCGATG ATGAAAAATC CCCTTCTCAT CGACTAGAGC ACTTCCTGCA CAAGCCGGTG
GCGTTCATCA TTTTGCCGAT TTTTGCCTTG GCCAATACCG GGATCGTGAT TGGCTCTGAA
TGGCAGCATG AACTGCTAAC CCCCAATAGT TTGGGCATCA TCGGTGGCTT GGTATTTGGG
AAACCGCTTG GGATTGCCTT GTTGAGCTTC GTTACCGTGG CGATCGGGGT TTGTCGGCTT
CCGGACGATC TGAAGTGGAC TCACATCGTT GGCGCCGGCA TCTTGGGAGG TATTGGTTTT
ACGATGTCCA TTTTCATCAC GAATCTTGCA TTTACCAACA ATGCGAGCAT TATCAACGCG
TCAAAAATGG CTATCTTGAT GGCATCTGTT GCTGCGGGGG GGCTCGGCTT TCTTTGGCTG
AGTTTTTTTC AGCAAAACGA TAACCAATGA
 
Protein sequence
MADTQTKLSK TFSNFFASEK TSGILLILCT ILSLSIANSL AGPAYQGFWH AIVAGLSIEH 
WVNDALMAVF FLFVGLELER ELYNGELSNF RNALLPIFAA IGGIGVPALI HYTLNVGTPT
QAGTGIPMAT DIAFALGVLA LLGSRVPASL KVFLTALAVM DDLGAIIVIA MFYTQQFSLV
YLLSALAVFG LLLVLNRIFR VMSLLPYLLG GALMWFLMLK SGVHATIAGV LLAFAIPFSA
KADDEKSPSH RLEHFLHKPV AFIILPIFAL ANTGIVIGSE WQHELLTPNS LGIIGGLVFG
KPLGIALLSF VTVAIGVCRL PDDLKWTHIV GAGILGGIGF TMSIFITNLA FTNNASIINA
SKMAILMASV AAGGLGFLWL SFFQQNDNQ