Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0675 |
Symbol | |
ID | 3568948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 743831 |
End bp | 746608 |
Gene Length | 2778 bp |
Protein Length | 925 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637679123 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_283901 |
Protein GI | 71906314 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGAGA CAAGCAAGAG GTCTGCGCCG CCTGTCGAAT CTCCCATTGT ATCGCCATCG CCATTGGACG GGCCGGCCAA ACAGTCGGCG CCCCATCGCG GTGCGTATCG ACACAAAGCG CACCAGCCGG GCGCTCCCGG TGTCATAAAC GCCCACTTTG GGGCGGGTAC GATATTTGCT GAACTCAGCA TAATTTACAT ATCCAACCCC ATAACTGTGC ACTTTCGACC AATCCGCCAA AATCATTCTG GCGCTACGCC ATCTCCGCTC AATCATTCCA GAGTGCTCGA CACCCTGGTC AAGAACCTCG AAGGCATGGC CTACCGCTGC CTTCACGACG CCGACTGGAC GATGGTTTTC GTCAGCGATG GTTGCCAGGA GCTCAGTGGC TATGCCTCTT CGGAGATTCT CGGCAAGACC GGCGTTTCAT GGGAAGAGAT TACCCACCCG CAAGACCGCG GGCGCGTCCG TGCATGCATC GAAGACGCGA TCGGCAGCGG CCAGCGTTTT GCGGTCCAGT ACCGGATCGT TTGCAAGTCG GGACAAGTCA AATGGGTCAT CGAGCGCGGC GTGGCGATTC GGGACGAGCT GGACGAGAGC GTGATCGAAG GTTTCATCGA GGATATTTCG GTACGCCGCA CGACACTCGA AGCGCTCGAG GCTGCCGAGC AGCGCTATCG CAACATCTTC GAACATGCCT CCGAGGGTAT TTTCCAGTCC ACCCGCGACG GCCATTACCT GGCCGCCAAC CCGGCGCTGG CTAAATTGTA TGGCTATGAC AATGCCCAGG CGTTGATGAC CGATCTGGCC GACATCGAAC GCCGGCTCTA TGTCCAGCCC AATCGTCGGG AAGAATTTCT CACGCTGATC GAAAAAAATG GCGCGATCCT CAACTTCGAG TCGGAGGTCT ATCGCCGCGA CGGTTCGCGC ATCTGGATTT CCGAGAATGC CCACGTCGTC TTCGGCCCCC AGGGTGAGTT CATCTGCTAT GAAGGCACGG TGCAGGACAT TTCGGAACGC AAGCGGACCG AGGCTCATCT CCAGCTCATG GCCATGGTCT TCTCGAACAG CAATGAAGCC ATCATCGTGA CCGATGCCAG CAACCGGATC ATCGCCACCA ATCCGGCTTT CACCTGCCTG ACCGGCTACC AGCCGGACGA CGTGATCGGC AAGAATCCGC GCATACTCTC GGCCGGTACG ACGCCGACCG AGGTTTTCTC CGACATGTGG ACATGTCTGC ATCGGGAAGG CGCCTGGCAA GGCGAGCTGT GGGACCGGAA AAAAAATGGC GAGGCCTACC CCAAATGGCT GTCAATCTCG CTGGTCCGCG ACGAGGATGG GCAGATTCGC AACCACATCG GCAGCTTCAT CGACATTTCC GAGCTCAAGG CGACACAGGA GCGCATCCGC CACCTCGCCC ACCACGATAC GCTGACCAAT CTGGCCAACC GCTTCAGCCT GCACGAAAAA CTCGCCCAGG CCCTCGCCTT CTGCAAACGT AACCGCATGC AGCTGGCCCT GATGCTGATC GATCTCGATC GCTTCAAGAC CATCAACGAT ACCCTCGGCC ACCAGGCCGG CGACGAACTG CTGGTCCAGG TGGCGAAACG CCTCTCGCAC GCCGTCCGCG AGAGCGACAT CGTGGCCCGG CTCGGCGGTG ACGAATTCGT GATCGCCCTG CCCGGCATCG GCTCGCCGGC CGACGCCGCC CACCTGGCCG ACGATATCAC TCGCGAGATT TCCGCCCCTT ACCTGATCAA AGGCCAGGAG CTGAGAACCT CGCCGAGCAT CGGCATCTGC GTGTACCCGG GAGACGGCTC GGAAATCGGC GATCTGCTGA AAAACGCCGA TGTCGCGATG TACCACGCCA AGGCCAATGG GCGGGGCAAT TACCAGTTTT TCACCGAAGA CATGAATATC GCGACCACCG AGCGCATGTG CCTCGAGTCG GACCTGCGTC TGGCCATCAC CCGCCGCGAG TTCCTGCTGC ACTACCAGCC GCAACTCGAC CTGCGCAGCG GCACCATCGT CGGCGTCGAG GCCCTGATCC GCTGGCAGCA TCCGACCCGC GGCCTGGTTT CCCCGGCCGA CTTCATCCCG ATTGCCGAGG AGAGCGGCAT GATCGCGGCC ATCGGCGACT GGGTGCTCGA GGAAGCCTGC CGCCAGCTCA AGGTCTGGCA GAACCGGGGC ATCACCCATC TGCGCATGTC GATCAACCTG AGTGCCGGAC AGTTTCTCGA CAAGACGCTG CCGGCCCGCA TCCATGAACT GCTGGCCGCT AACGACCTGA GTGCGGACCG GCTCGACCTG GAAGTCACCG AATCGATGTC GATGGCGTCG CCGGACGAAT CGATCAGCGT GATGAAAACC CTGAGCAGCA GCGGGCTGAC CCTGTCCATC GACGATTTCG GCACCGGCTA CTCGTCACTG GCCTATCTCA AGCTGCTGCC GATCCACACG CTGAAAATCG ACCGCTCCTT CGTCAAGGAC ATCGAATCCG ATCCCAACGA CGCCGACATC TGCGACGTCA CCGTGCTGCT TGCCCACAAG CTTGGGCTGG AAGTCGTCGC CGAAGGCGTC GAGACCGAGG CGCAACTGAA ATTCCTGCTC AGCATCGGCT GCGAAAAGGT CCAGGGCTAC CTGATCAGCA AGCCGCTGCC GGCCGACCAG GCGGAAAGGT TCATCCGCAA CAATCCGCCG ATGAAGGGCC TCGGGACCAT TGACCTGTGG CCAGCCCAGG AACAACTCAC CCCAATCGAA GAGCACTGCC ATGCGTAA
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Protein sequence | MTETSKRSAP PVESPIVSPS PLDGPAKQSA PHRGAYRHKA HQPGAPGVIN AHFGAGTIFA ELSIIYISNP ITVHFRPIRQ NHSGATPSPL NHSRVLDTLV KNLEGMAYRC LHDADWTMVF VSDGCQELSG YASSEILGKT GVSWEEITHP QDRGRVRACI EDAIGSGQRF AVQYRIVCKS GQVKWVIERG VAIRDELDES VIEGFIEDIS VRRTTLEALE AAEQRYRNIF EHASEGIFQS TRDGHYLAAN PALAKLYGYD NAQALMTDLA DIERRLYVQP NRREEFLTLI EKNGAILNFE SEVYRRDGSR IWISENAHVV FGPQGEFICY EGTVQDISER KRTEAHLQLM AMVFSNSNEA IIVTDASNRI IATNPAFTCL TGYQPDDVIG KNPRILSAGT TPTEVFSDMW TCLHREGAWQ GELWDRKKNG EAYPKWLSIS LVRDEDGQIR NHIGSFIDIS ELKATQERIR HLAHHDTLTN LANRFSLHEK LAQALAFCKR NRMQLALMLI DLDRFKTIND TLGHQAGDEL LVQVAKRLSH AVRESDIVAR LGGDEFVIAL PGIGSPADAA HLADDITREI SAPYLIKGQE LRTSPSIGIC VYPGDGSEIG DLLKNADVAM YHAKANGRGN YQFFTEDMNI ATTERMCLES DLRLAITRRE FLLHYQPQLD LRSGTIVGVE ALIRWQHPTR GLVSPADFIP IAEESGMIAA IGDWVLEEAC RQLKVWQNRG ITHLRMSINL SAGQFLDKTL PARIHELLAA NDLSADRLDL EVTESMSMAS PDESISVMKT LSSSGLTLSI DDFGTGYSSL AYLKLLPIHT LKIDRSFVKD IESDPNDADI CDVTVLLAHK LGLEVVAEGV ETEAQLKFLL SIGCEKVQGY LISKPLPADQ AERFIRNNPP MKGLGTIDLW PAQEQLTPIE EHCHA
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