| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0644 |
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| Symbol | |
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| ID | 3568911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 707027 |
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| End bp | 708757 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637679087 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_283871 |
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| Protein GI | 71906284 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.0351712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.29451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACTT CGCAGTTCTT TTTTACAACA CTCAAGGAAG CCCCGGCCGA CGCCGAGGTT
ATCAGCCAGA AGATGATGCT GCGCGCCGGC TATATCAAGC GCGCCGCAGC CGGCATCTAC
ACATGGATGC CACTTGGCCT GCGCGTGCTG CGCAAGGTAG AAAACATTGT CCGCGAAGAG
ATGAACAACG CGGGCGCACT GGAATTATTG ATGCCAGCCG TACAACCGGC CGAACTGTGG
CAAGAATCGG GGCGCTGGGA ACAATATGGA CCGGAATTGC TGCGTTTCAA GGATCGTCAC
CAGCGCGAAT TCGTCATCGG CCCAACGCAT GAAGAAGTCA TCACTGATGT CGTTCGCCGT
GACGTGAAGA GTTATCGCCA ATTGCCGATC CACCTGTATC AAATCCAGAC CAAATTCCGC
GATGAAATCC GTCCCCGCTT CGGCGTCATG CGTGGTCGAG AGTTCCTGAT GAAGGACGGC
TACTCGTTCC ACGCCTCGTT CGACGATCTG AAGCGCGAAT ATGGCAACAT GTACGACACC
TACAGTCGTA TTTTCAGCCG TCTTGGCCTG AAATTCCGTG CGGTGGCCGC AGATACCGGT
TCGATCGGCG GTACCGGTTC GCACGAATTC CATGTCCTGG CCGATTCCGG CGAGGATGAC
ATCGCCTTTT GCCCGGACTC CGGCTATGCC GCCAACGTCG AACTGGCCGA AGCCATGGCC
CCGAACGAGG CGCGTGCCGC CGCCTCCACG TTGATGGAAA AGACCCACAC GCCGGGCAAG
ATGGCCTGCG CCGATGTCGC CAAATTCCTC GAACTGCCGC TGGACAGAAT CGTCAAATCG
ATTGCGGTCA TGAGCGAGAA GGAAGATGGC AGCCAGACCT TCGCACTGCT GCTGCTGCGT
GGCGACCACG AACTGAACGA AATCAAGGCA AGCAAAATTG CCGCCATCAA TCCTTTCCGC
TTCGCCACCG AAGAAGAAGT GATCGAGCGC CTCGGCTGCA AGCCAGGATT CATTGGTCCG
GTTGCGATCG ACGCGACGAA GGTAGCCGTT TTTGCCGACC GTAGCGTGGC CAACATGAGC
GATTTCGTCT GTGGCGCCAA CGAGGCCGGC TATCACATGA CGGGCGTCAA TTTCGGCCGC
GACCTGCCGG AACCGGAAGT CTTCGACATT CGCAACGTCG TCGCCGGCGA CGCATCGCCG
GACGGCCAGG GTAAGCTTGA AATCCTGCGT GGCATCGAAG TCGGTCACAT TTTCCAATTG
CGCCAAAAAT ATGCTGAAGC CTTGAACTGT GTCTATCTGG ACGACAGCGG CAAGAGCCAG
ATCATGGAGA TGGGCTGCTA CGGCATTGGC GTTTCCCGCA TCGTGGGCGC CGCTATCGAA
CAAGGTAACG ACGACAAGGG CATCATCCTG CCGCCGGCCA TTGCTCCGTT TGAAGTCTGT
ATCGTGCCAA TGGGCTACCA CAAGAGCGAA GCGGTCAAGG CAAGTGCCGA CCAGCTTTAT
GCCGACCTGA AGAAGATCGG CGTCGATGTC GTGCTCGATG ACCGCAACGA GCGCCCGGGC
GTCATGTTCG CCGACATGGA ACTGATCGGC ATCCCGCATC GCGTGGTGAT CGGCGAGCGT
GGCCTGAAGG ACGGGCTGTT CGAATACAAG AGCCGAATCG ATGCCGAACC AACCATGGTT
GCCCAAACCG ACATCGTCAC CCTGCTGCAA GGGAAGCTGT GCGCCGCCTG A
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| Protein sequence | MRTSQFFFTT LKEAPADAEV ISQKMMLRAG YIKRAAAGIY TWMPLGLRVL RKVENIVREE
MNNAGALELL MPAVQPAELW QESGRWEQYG PELLRFKDRH QREFVIGPTH EEVITDVVRR
DVKSYRQLPI HLYQIQTKFR DEIRPRFGVM RGREFLMKDG YSFHASFDDL KREYGNMYDT
YSRIFSRLGL KFRAVAADTG SIGGTGSHEF HVLADSGEDD IAFCPDSGYA ANVELAEAMA
PNEARAAAST LMEKTHTPGK MACADVAKFL ELPLDRIVKS IAVMSEKEDG SQTFALLLLR
GDHELNEIKA SKIAAINPFR FATEEEVIER LGCKPGFIGP VAIDATKVAV FADRSVANMS
DFVCGANEAG YHMTGVNFGR DLPEPEVFDI RNVVAGDASP DGQGKLEILR GIEVGHIFQL
RQKYAEALNC VYLDDSGKSQ IMEMGCYGIG VSRIVGAAIE QGNDDKGIIL PPAIAPFEVC
IVPMGYHKSE AVKASADQLY ADLKKIGVDV VLDDRNERPG VMFADMELIG IPHRVVIGER
GLKDGLFEYK SRIDAEPTMV AQTDIVTLLQ GKLCAA
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