| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0639 |
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| Symbol | |
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| ID | 3568906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 701114 |
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| End bp | 702829 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637679082 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_283866 |
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| Protein GI | 71906279 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCAA CCCCTCAAAA TCCTCCACTT AGCGGCTTGG CGCGCGCGCT CGTCCAGGCC
GGACATCTCA AGGAGGTAGA GGCGGAACAA TTGCTGGCCC AGGCCCACAG CACCAAGACT
TCGCTGATCG AACAGATCAT TACAAGCCAG AAATCCAGTG CAATCGACAT AGCGCGCTTT
GTCGCCGATA CCTTTGGCTA TCCACTACTT GACCTCAACG CTTTCGATGA AGCCCACATT
CCGTCGGATG CCATCGACCG TAAGCTGATT GCGACGCACA AGGTCATTCC ACTCAACAAG
CGCGGAAACC GTTTATCGGT AGCAATTGCT GACCCAACCA ACCTTCGTGC GCTGGACGAA
ATTCGCTTCC AGACCGGTCT GGCTGTCGAT CCGATTGTCG TCGAACACCC AAAACTGGCG
CCGCTCGTCA ACAAATATGC CGAGACAGCC GCCGAAGCGC TGAAAAACTT CACCAGCGAG
GATCTCAACC TCGATTTTCT GGACGAAGAA ACCTCCAGCA AAGCTGACGA AGCCGCAGGG
CAGGAAATCG ATGACGCACC GGTCGTCAAA TTCATCCAAA AAATGCTGCT CGATGCCATC
AATGATGGAG CATCGGACAT CCATTTCGAA CCATACGAAA AGTTTTATCG CATTCGCTTC
CGCGTCGACG GCATCCTGCG CGAAGTAGCC ACTCCACCGC TGGCCATCAA GGAAAAAATT
GCCTCGCGCA TCAAGGTCAT TTCCCGGCTT AATATCGCCG AAAAGCGCGT CCCGCAGGAC
GGCCGGATGA AACTGGTGCT TTCGAAGACC CGTGCCATCG ATTTCCGGGT CAGCACACTA
CCGACGCTTC AGGGCGAGAA AATCGTTATG CGTATTCTCG ACCCAAGCTC AGCCACCTTG
GGCATCGAGG CGCTAGGCTA CGAGCCGGAG CAAAAAGCAG CAATAATGGA CGCCATCAGC
CGCCCCTATG GGATGGTACT GGTCACCGGA CCGACAGGTT CTGGCAAAAC CGTTTCGCTC
TACACCTGCC TCAACATCCT GAATAAGGAT GGCATCAACA TTTCGACAGC GGAAGACCCG
GCTGAAATCA ATCTACCGGG TGTCAATCAA GTCAACGTCG ACGACCGTGC TGGCCTGACC
TTCCCTGTCG CACTAAAGGC ATTCCTGCGC CAGGATCCGG ACATCATCAT GGTCGGCGAA
ATTCGTGACC TGGAGACCGC CGAGATTTCC ATCAAGGCGG CACAAACGGG TCACCTGGTG
CTCTCGACGC TGCACACCAA CGATGCCCCG CAAACACTGA CTCGACTGAT GAACATGGGC
GTCCCCATGT TCAATATCGC CTCCAGCGTG CTGTTGATCA CCGCTCAGCG CTTGGCGCGA
CGGCTATGCA ACTGCAAGAA ACCGATGACC GTACCCGACC AGGCACTACT GGATGCAGGC
TACTCGGAAG CCGATCTCGA CGGTTCGTGG ACGCTGTTTG GCCCAGGAGG ATGTGAACGG
TGCAAAGGGA CCGGCTACAA GGGACGGGTC GGCATTTATC AGGTCATGCC CATTTCCGAA
GCTATGCAAC GCATGATCAT GAGCGGCGCA TCTGCACTGG ACTTGGGCGC CCAAGCGAAA
GCCGAAGGCG TGAAAAACCT CCGCGAATCC GGACTATTAA AAGTCAAACA AGGTGTGACC
TCGCTTGACG AGGTGCTCAG CACCACCAAC GCTTAA
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| Protein sequence | MAATPQNPPL SGLARALVQA GHLKEVEAEQ LLAQAHSTKT SLIEQIITSQ KSSAIDIARF
VADTFGYPLL DLNAFDEAHI PSDAIDRKLI ATHKVIPLNK RGNRLSVAIA DPTNLRALDE
IRFQTGLAVD PIVVEHPKLA PLVNKYAETA AEALKNFTSE DLNLDFLDEE TSSKADEAAG
QEIDDAPVVK FIQKMLLDAI NDGASDIHFE PYEKFYRIRF RVDGILREVA TPPLAIKEKI
ASRIKVISRL NIAEKRVPQD GRMKLVLSKT RAIDFRVSTL PTLQGEKIVM RILDPSSATL
GIEALGYEPE QKAAIMDAIS RPYGMVLVTG PTGSGKTVSL YTCLNILNKD GINISTAEDP
AEINLPGVNQ VNVDDRAGLT FPVALKAFLR QDPDIIMVGE IRDLETAEIS IKAAQTGHLV
LSTLHTNDAP QTLTRLMNMG VPMFNIASSV LLITAQRLAR RLCNCKKPMT VPDQALLDAG
YSEADLDGSW TLFGPGGCER CKGTGYKGRV GIYQVMPISE AMQRMIMSGA SALDLGAQAK
AEGVKNLRES GLLKVKQGVT SLDEVLSTTN A
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