Gene Daro_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0620 
Symbol 
ID3568788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp686498 
End bp687163 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content57% 
IMG OID637679063 
Producthypothetical protein 
Protein accessionYP_283847 
Protein GI71906260 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value0.496074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTA ACCCCGACGC CCGCCAACTG GGCTTGATCA AGATCGCCGT TTTCATCACT 
TGCCTGCTTC CCTTTGGGCG TCTGCTATGG GCAGCCTATA GCGATGACTT TGGCCCCAAT
CCGGTTGAAT TCGTGCAGCG GTGGACGGGC AGCTGGACTT TCAATCTGTT GCTGATCACC
CTGTGCGTCA CGCCGCTACG CACGATCACC CAGTGGCACT GGCTGCTCAG GCTACGGCGT
ATGCTCGGCC TGTTCTGCTT TTTCTACGCC AGCCTGCACT TCCTTTCGTT CATCGGCTTT
GATCATGCCT TCGTACTCGA GGATATTGCC AAGGACATCT ACAAGCGGCC CTTCGTCAGC
GCTGGCTTCG CCGCTTTCAT TCTGCTGATT CCCTTGGCCG CAACATCGAG CAACTGGGCG
ATTCGCAAGC TGGGCGGCAG GAAGTGGCAA GAACTGCACC GCAGCATTTA CCTGACCGGC
ATACTCGCGA CAATTCATTA CTTCTGGCTG GTCAAGGCAA CGGCGCTACT TTGGCCGCTG
GCCTATTCGG TGGTACTGGC CGTCCTGCTT GGCTGGCGAA TTCGCGAGCG CCGACGCAAG
GCGATTCCGG TACCGCGGTT CCAGTCGGCC AAACCGCTGA AATTTTTCAA GCAGAAACCT
GATTGA
 
Protein sequence
MSFNPDARQL GLIKIAVFIT CLLPFGRLLW AAYSDDFGPN PVEFVQRWTG SWTFNLLLIT 
LCVTPLRTIT QWHWLLRLRR MLGLFCFFYA SLHFLSFIGF DHAFVLEDIA KDIYKRPFVS
AGFAAFILLI PLAATSSNWA IRKLGGRKWQ ELHRSIYLTG ILATIHYFWL VKATALLWPL
AYSVVLAVLL GWRIRERRRK AIPVPRFQSA KPLKFFKQKP D