| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0617 |
|---|
| Symbol | |
|---|
| ID | 3568785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 683786 |
|---|
| End bp | 684529 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637679060 |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_283844 |
|---|
| Protein GI | 71906257 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | [TIGR00201] comF family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATC ACGGACGCTC CGGCTCAATG TCAATTTTAC CCCACCCCGG CGGACTCAAG
GGCCTCGCCA GAAAACTCGG CAATGCACTA TTACCCGGCA GTTGCCTGCT TTGTGGCGCG
AACAGCCGGG ACGAATTGCT CTGCCCGGAA TGCAACGCGG ACCTGCCCGG CCTCCCGCCC
CAGCTTTGTC CGCTTTGTGC CGACCAGACC ACGCACGGCG AACGCTGCGG CGCCTGCCTG
AAAGATGCCC CCTGTTTCGA CCGCACCATC GCTCTTTTTC ACTATGATTT CCCACTCGAC
CGGATCATTC ACGCGCTGAA ATACGGTCAC CAACTGGCTG TGGCTCCCTG GTGCAGCCGA
CGCCTGGGCA GGCGGATAGC GGCAAATGAA CTCGACTTGA TCATTCCCCT CCCTCTGCAT
CCGCAACGCC TGATTGAGCG CGGTTTCAAC CAGTCGGCTG AAATTGCACG AACGCTGGGC
AACGATCTGA ACATTCCGGT CGACCACACC AACGTGTTGC GCACGCGCCC TACAGCACCC
CAGGCTGATC TCCCGCACAA GGAACGCAAG AAGAACGTGC GTGGCGCCTT CGAATGTCGC
ACCGATCTCA GCGGCCGGCG CCTGTTGCTG ATCGACGATG TCATGACGAC CGGCGCCACC
GTCAATGAAT GCGCCCGCGT CCTGAAATTG CATGGCGCGG CATCGGTCAC GGTCGCCGTG
ATTGCCCGTG CGCTCAGGCA CTGA
|
|---|
| Protein sequence | MNYHGRSGSM SILPHPGGLK GLARKLGNAL LPGSCLLCGA NSRDELLCPE CNADLPGLPP
QLCPLCADQT THGERCGACL KDAPCFDRTI ALFHYDFPLD RIIHALKYGH QLAVAPWCSR
RLGRRIAANE LDLIIPLPLH PQRLIERGFN QSAEIARTLG NDLNIPVDHT NVLRTRPTAP
QADLPHKERK KNVRGAFECR TDLSGRRLLL IDDVMTTGAT VNECARVLKL HGAASVTVAV
IARALRH
|
|---|
| |