Gene Daro_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0616 
Symbol 
ID3568784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp683276 
End bp683740 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content61% 
IMG OID637679059 
ProductRNA methyltransferase TrmH, group 2 
Protein accessionYP_283843 
Protein GI71906256 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGCCG TCGTTCTCTA CCGCCCGGAA ATTCCGCCCA ACACGGGCAA CATCATCCGC 
ATGTGCGCCA ATACCGGCGC CGAACTGCAT CTGGTCGAAC CGCTGGGCTT TGACCTCAGC
GACAAGCATC TGCGCCGGGC TGGCCTGGAC TATCACGAAT ACGCGCGCAT CGTACGCCAT
GCCGACTGGG CTGCCTGCAA GGCCGCACTG GCTGGACGGC GGCTTTTTGC GATGACCACC
AAGGGAACAG CCAGCCCGTT CTCCACGGCG CTTGAGGCAA ACGACGTTTT TGTCTTTGGC
TGCGAAACGA GCGGCTTGCC ACCCGAAATA CGGGCTGAAT TCAGCCCGGA ACGATGCTTG
CGTTTGCCGA TGCTACCCGG GCAACGCAGC CTCAATCTGT CGAATGCGGC GGCGGTGACT
GTTTTTGAAG CCTGGCGCCA GACCGGCTTC CCGGGTTCGC TTTAA
 
Protein sequence
MFAVVLYRPE IPPNTGNIIR MCANTGAELH LVEPLGFDLS DKHLRRAGLD YHEYARIVRH 
ADWAACKAAL AGRRLFAMTT KGTASPFSTA LEANDVFVFG CETSGLPPEI RAEFSPERCL
RLPMLPGQRS LNLSNAAAVT VFEAWRQTGF PGSL