| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0615 |
|---|
| Symbol | gpsA |
|---|
| ID | 3568783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 682290 |
|---|
| End bp | 683279 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637679058 |
|---|
| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_283842 |
|---|
| Protein GI | 71906255 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAA CGCTGCTTGG TGCTGGCGCT TGGGGGACGG CGCTATCCAT CGCCTTCTCC
GGCAAGCATG ATCTGACGCT CTGGTCCCGT GAGGTAGATG TCGCGGATGA TCTGCGCAAA
ACTCGCGAAA ATCACCGCTT CTTTCCTGGC TACAAATTGC CGGAGTCAGT CGCTGTGTCG
ACTGATTTCG AGGTGGCCGT TGCCGGTGCC GAGTTGCTTG TTGTCGCTAC GCCGATTGCC
GGACTGCGGC CGACGGTCGA GCGCTTGCAG GCACTTGGTT GCAAGCTTCC GGTGCTTTGG
GTGTGCAAGG GTTTTGAGGC CGGTAGTGGC AAGTTGCCGC ATCAGGTGGT TGCCGAGGTG
CTAGGCAAGG AGGCGCTCTG TGGTGCCCTT TCCGGCCCGA GCTTTGCGGA AGAGGTTGCC
GCAGGGCAGC CGACGGCGGT ATCGCTGGCC ACGAATGATC CGGCCTTTGC CCGTGAGGCC
GCTCGCCAAT TGCACACGAC CCGCCTGCGC ATTTATGCCA ATGATGATCT GGTTGGCGTC
GAGGTCGGTG GTGCGGTCAA GAATGTCCTG GCCATTGCCA CCGGTGTTTG TGATGGGCTT
GGCCTCGGCC TGAATTCCCG TGCTGCGCTG ATGACCCGTG GCCTGGCTGA AATCGCCCGC
CTCGGTCTGG CGCTGGGGGC TGAACGCCAG ACTTTCATGG GGCTGGCTGG CATGGGCGAT
CTGATCCTGA CCTGTACTGG CGATCTGTCG CGCAATCGTC GGGTTGGTTT GGCGTTGGCG
CAGAACAAGT CGCTGCCGCA GATCCTTGAA GAGCTGGGGC ACGTCGCTGA AGGTGTTTAT
ACCGCCCGGG AAGTCGATCG GCTGGCGGCC AGGCTCGGCG TCGAGATGCC GATCAGTGCG
GCTGTTGCGG CCGTTCTTGA TGGCCGTCTG ACGGCAGCTC AGGCGGTTGA GCAGTTGATG
GCCCGCGATC CCAAGGAAGA GCTGGCTTAA
|
|---|
| Protein sequence | MKITLLGAGA WGTALSIAFS GKHDLTLWSR EVDVADDLRK TRENHRFFPG YKLPESVAVS
TDFEVAVAGA ELLVVATPIA GLRPTVERLQ ALGCKLPVLW VCKGFEAGSG KLPHQVVAEV
LGKEALCGAL SGPSFAEEVA AGQPTAVSLA TNDPAFAREA ARQLHTTRLR IYANDDLVGV
EVGGAVKNVL AIATGVCDGL GLGLNSRAAL MTRGLAEIAR LGLALGAERQ TFMGLAGMGD
LILTCTGDLS RNRRVGLALA QNKSLPQILE ELGHVAEGVY TAREVDRLAA RLGVEMPISA
AVAAVLDGRL TAAQAVEQLM ARDPKEELA
|
|---|
| |