Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0608 |
Symbol | |
ID | 3568776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 677415 |
End bp | 678857 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637679051 |
Product | peptidase S41A, C-terminal protease |
Protein accession | YP_283835 |
Protein GI | 71906248 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCAGC TTGAAATGAG CAAAACGAAA ACCATTAGCT TGACCGTAGG CGCATTCGTC GCCGGCGCAC TGATCAGCCT GAACTTCCCG GCACTCGCCG ACAAGGAGGC GAAGCCCGGA CTGCCGATCG AGGAGCTGCG CACCTTTGCC GAGGTCTATA GCGCCATCAA GCAAGGCTAT GTCGAGCCGG TCGAAGACAA GAAGATGATT ACCAATGCCA TCTCCGGCAT GCTGTCCAAC CTCGACCCGC ACTCCGCCTA CCTAGATGCC GATGCCTTCA AGGATCTGCA GGTCGGCACC CAGGGGGAAT TTGGCGGCCT CGGTATCGAA GTGGGCATGG AAGATGGCTT GGTCAAGGTC GTTTCGCCGA TCGAGGACAC CCCGGCCTAT CGCGCTGGCG TCAAGTCCGG CGACCTGATC TTCAAGCTGG ATGACACCAT GGTCAAAGGC CTGACGCTGT CCGAAGCGGT CAAGAAGATG CGCGGCAAGC CGAAGACCCC GATCAAGCTG TCGATCATCC GCAAGGGTGA AACCAAGCCC ATCGAATTGA CCTTGATCCG CGAAGTGATC AAGGTGCAGA GCGTCAAGTC CAAGCTGATC GAACCGGGCT ACGGCTGGGT CCGTATCACC CAGTTCCAGG AAAACACCAT TGCCGAACTG GCCAAGCACG TCGCTGGCCT CTACAAGGAC GGCAACAAGC TGCAAGGACT GGTGCTTGAC CTGCGTAACG ACCCGGGTGG CCTGTTGCAT GGCGCGATCG GCGTCTCCGC GGCCTTCCTG CCGCCGGACG TCAAGGTGGT TTCCACCGAT GGCCGCACTG AAGATGCCAA GCAGGAATTC AGAGCCCGGA CGCAGGACTA TCAGCGCGGC ACCAAGGAAG ATTCGCTGAA GGGCATGCCG ATCGAAGCCA AGAATGTGCC GATGGTCGTC CTGGTCAATG GCGGCTCAGC CTCGGCTTCC GAAATCGTTG CCGGCGCATT GCAGGATCAC AAGCGCGCCG TCATCGTCGG CACCCAGACC TTCGGCAAGG GCTCCGTGCA ATCCGTGCTG CCACTCCCCG GCAACACCGC GATCAAGCTG ACCACGGCCC GCTACTACAC GCCGTCGGGG CGTTCCATCC AGGCCAAGGG CATCACACCG GACATCGTCG TCGAGGAAAG CCTGAATGGC AACGCCGCCG CATCAATGCG TCTGCGCGAG GCCGATCTGG ACCGCCACCT GAGCAACGAC CGCGACAAGG AAGCCGGCAA GGAACTTCCG AAGGCCGACA CCAAGCCGCA GGCCAAGACC TCGCCGAAAT CCGGCAAGGA CAAAAACGGC AAGGAAGACG CCGAAGACGA ACTGCCGCAA CGACTGGAAT ATGCGAGCAA GAGCGATTAC CAATTCCAGC AGGCGATAAA CCTACTCAAG GGTCTGCAGA TCATGCAGAA TAAAGCCCAA TAG
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Protein sequence | MGQLEMSKTK TISLTVGAFV AGALISLNFP ALADKEAKPG LPIEELRTFA EVYSAIKQGY VEPVEDKKMI TNAISGMLSN LDPHSAYLDA DAFKDLQVGT QGEFGGLGIE VGMEDGLVKV VSPIEDTPAY RAGVKSGDLI FKLDDTMVKG LTLSEAVKKM RGKPKTPIKL SIIRKGETKP IELTLIREVI KVQSVKSKLI EPGYGWVRIT QFQENTIAEL AKHVAGLYKD GNKLQGLVLD LRNDPGGLLH GAIGVSAAFL PPDVKVVSTD GRTEDAKQEF RARTQDYQRG TKEDSLKGMP IEAKNVPMVV LVNGGSASAS EIVAGALQDH KRAVIVGTQT FGKGSVQSVL PLPGNTAIKL TTARYYTPSG RSIQAKGITP DIVVEESLNG NAAASMRLRE ADLDRHLSND RDKEAGKELP KADTKPQAKT SPKSGKDKNG KEDAEDELPQ RLEYASKSDY QFQQAINLLK GLQIMQNKAQ
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