Gene Daro_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0604 
SymbolnrdR 
ID3568772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp674566 
End bp675030 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content58% 
IMG OID637679047 
Producttranscriptional regulator NrdR 
Protein accessionYP_283831 
Protein GI71906244 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATGTC CTTTCTGCGG TGCCGAAGAT ACGGCGGTAG CCGATACCCG TCTCAATGAC 
GAGGCTGACG TCGTTCGTCG TCGCAGAAAG TGCAATGCCT GCGACAAACG TTTTACCACC
TACGAGCGGG CTGAAATCCA GCTGCCGCAG GTGGTCAAGA AAAATGGTCT GCGTACCGAG
TTCAGCCGGG CAAAACTGCG GGCCAGTCTG GAACTGGCGC TCCGCAAGCG GCCAGTTTCC
ATTGAGTCGG TCGATGCGGC GGTGGCCGAT ATTGAAGAGC GCCTGCTGTC GGCAGGTGAG
CGCGAGGTGA CAACGCAGCA GCTGGGCGAA CTGGTCATGC GCGAGTTGAA GAAGCTCGAC
AAGGTGGCCT ATATCCGCTT CGCCTCGGTC TATCGCAATT TTGAAGACGT GGATGCCTTC
TCCAGGGCGA TCCGCGAAGT CTCTCCCGCC GCCAAGAAAA AATGA
 
Protein sequence
MKCPFCGAED TAVADTRLND EADVVRRRRK CNACDKRFTT YERAEIQLPQ VVKKNGLRTE 
FSRAKLRASL ELALRKRPVS IESVDAAVAD IEERLLSAGE REVTTQQLGE LVMRELKKLD
KVAYIRFASV YRNFEDVDAF SRAIREVSPA AKKK