| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0601 |
|---|
| Symbol | |
|---|
| ID | 3568769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 671810 |
|---|
| End bp | 672403 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637679044 |
|---|
| Product | tripartite ATP-independent periplasmic transporter DctQ |
|---|
| Protein accession | YP_283828 |
|---|
| Protein GI | 71906241 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 0.452096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTTC TGCTCAAGCT CTCGCAGCTG ATCGACTGGC TCAACGAGCG TGTTGCCAGA
GGCGCATTCT GGTTGGTTCT GGCAATGACC ATTGTCAGCG CCGGCAACGC GGTCGTGCGC
TTTCTTTTTG ACTACAGTTC AAACGGCCTG CTGGAGATCC AGTGGTATCT GTTTGCTGCG
GTTTTCCTGC TCTGCTCTCC TTACACCCTG CAACGTAACG AGCATGTCCG CATCGACGTT
TTATCCTGCA AGCTCTCACC ACGCGGCCTG GCCGTCATCG ACATCATCGG CAGCCTGTTC
TTCCTGTTGC CCATGGTCAT CACGATCCTC TGGCTGTCGC TGCCGCTGAT CGCCGACTCC
ATCAAGATCA ATGAAATGTC GGCCAACGCC GGCGGCCTGC TACGCTGGCC GGTCAAGATC
CTGCTGCCGA TCGGTTTCAC GCTGCTGGCG CTGCAAGGCA TTTCCGAGCT GATCAAGCGC
ATTGCCTTCC TGGCCGGAAT GATCGACGAC CCGAACGACA AGAAAAAAGG CCCGACGGCC
GAAGAAGAAC TGGCCGCCGC CATCGCTGCT GCCAAAGCCA AGGAGGCCAA ATAA
|
|---|
| Protein sequence | MTLLLKLSQL IDWLNERVAR GAFWLVLAMT IVSAGNAVVR FLFDYSSNGL LEIQWYLFAA
VFLLCSPYTL QRNEHVRIDV LSCKLSPRGL AVIDIIGSLF FLLPMVITIL WLSLPLIADS
IKINEMSANA GGLLRWPVKI LLPIGFTLLA LQGISELIKR IAFLAGMIDD PNDKKKGPTA
EEELAAAIAA AKAKEAK
|
|---|
| |