| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0600 |
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| Symbol | |
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| ID | 3568768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 670347 |
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| End bp | 671810 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637679043 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_283827 |
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| Protein GI | 71906240 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGG TCATCGCCAA TATGGCGCCG CTGATGTTTG GCGCCCTCGT GCTATTCCTG
CTCTTCGGCT ACCCGGTTGC CTTCGCCCTG GCGGCCAACG GCATCGTCTT CGGCCTACTT
GGCATCGAAC TCGGCCTGCT CACCCCGGCG CTGTTCCAGG CCCTGCCCGA GCGCATCTTC
GGCATCATGG CCAACGACAC GCTGCTCGCC ATCCCCTTCT TTACCTTCAT GGGGCTGATA
TTAGAGCGAT CCGGCATGGC GGAAGACCTG CTCGACACCA TCGGCCAATT GTTCGGCCCG
ATGCGTGGCG GTCTGGCCTA CGCCGTGATC TTCGTCGGCG CCCTGCTTGC TGCGACGACC
GGCGTGGTTG CCGCCTCAGT CATCTCGATG GGTCTGATTT CGCTGCCGAT CATGCTGCGC
TACGGCTACG ACAAGCGACT GGCATCCGGC GTCATCGCCG CTTCCGGCAC GCTGGCCCAG
ATTATCCCGC CGTCACTGGT ACTGATCATC ATGGCCGACC AGCTCGGCCG TTCGGTCGGC
GACATGTACG AAGGTGCCAT GATCCCCGGC CTGGTGCTGA CCAGCATGTA CGTCGGCTAC
GTGGTCCTTC TCAGCATCAT CAAGCCCAAG ACCTGCCCGG CCCTGCCGCT GGAAGCCCGC
TCCCTGCGCG GCATCAAGCT GATGCTCCGC GTACTGACCA CGCTGGTGCC GCCACTGGTC
CTGATCTTCC TGGTTCTCGG CACCATCTTC CTCGGCATTG CAACGCCGAC CGAAGGCGGC
GCCATGGGTG CAGCCGGCGC GCTGATCCTG GCCCTGGCCC GCAAGCGGAT TACCTTCAGC
CTGCTCAAGC AGGCCATGGA AACCACCGGC AAGCTGTCGT CCTTCGTGGT CTTCATCCTG
GTCGGCTCGA CGGTGTTCGG CCTGGTCTTC CGCGGCGTCA ATGGCGACCT GTGGGTCGAA
CACCTGCTGC TCGGGCTGCC CGGCGGCCAG GTCGGCTTCC TGATCGTGGT CAATATCCTG
GTCTTCGTGC TCGCCTTCTT CCTCGACTTC TTCGAACTGT CCTTCATCAT CGTGCCCCTG
CTGGCACCGG TCGCGGACAA GCTGGGTATC GATCTGGTCT GGTTCGGCGT ACTGCTCGCG
GTCAACATGC AGACCTCGTT CATGCACCCG CCGTTCGGCT TCGCTTTGTT CTACCTGCGC
TCGGTCGCCC CGAGTTCGGT CAAGACAACG GACATCTACT GGGGAGCCAT CCCGTTCGTC
TGCATCCAGA TCATCATGGT CGCGATCATC ATCATCTTCC CGAACATCGT CAGCTACGGC
GACCCGGCGG AGAAGGCCCG GATCGAGCAA CAGGGCGATG TCGACCTCAG TACGATGATG
CAGGAGGGCG AAGGGGCCAA GGCGCCGACC GAAGACTCGG CGGCCGATCT GCTGAAGAAT
CTGCAAAGCA ACGAAAACAA GTAA
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| Protein sequence | MEWVIANMAP LMFGALVLFL LFGYPVAFAL AANGIVFGLL GIELGLLTPA LFQALPERIF
GIMANDTLLA IPFFTFMGLI LERSGMAEDL LDTIGQLFGP MRGGLAYAVI FVGALLAATT
GVVAASVISM GLISLPIMLR YGYDKRLASG VIAASGTLAQ IIPPSLVLII MADQLGRSVG
DMYEGAMIPG LVLTSMYVGY VVLLSIIKPK TCPALPLEAR SLRGIKLMLR VLTTLVPPLV
LIFLVLGTIF LGIATPTEGG AMGAAGALIL ALARKRITFS LLKQAMETTG KLSSFVVFIL
VGSTVFGLVF RGVNGDLWVE HLLLGLPGGQ VGFLIVVNIL VFVLAFFLDF FELSFIIVPL
LAPVADKLGI DLVWFGVLLA VNMQTSFMHP PFGFALFYLR SVAPSSVKTT DIYWGAIPFV
CIQIIMVAII IIFPNIVSYG DPAEKARIEQ QGDVDLSTMM QEGEGAKAPT EDSAADLLKN
LQSNENK
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