Gene Daro_0598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0598 
Symbol 
ID3568766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp668574 
End bp669662 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content57% 
IMG OID637679041 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_283825 
Protein GI71906238 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTC GTGATTTTCT GAAAAAGGCT TCTATCGGTG CCGCTGCCGG TGCTGCAACC 
ACGCTGGCTG CTCCAGCCAT CGCCCAGTCG TCCCCGAGCA TCAAGTGGCG CCTGACCTCC
AGCTTCCCGA AGAGCCTGGA CACCATTTAC GGTGGTGCCG AAGTGCTGGC CAATCGCCTG
CGTGCGATGA CTGGCGGCAA GTTCGACATC CGTGTATTTC CTGGCGGCGA GATTGTCCCC
GGCCTGCAGG CGCTCGATGC GGTGCAGCAA GGTACGGTTG AAGTCTGTCA CACCTGCTCC
TATTACTACG TTGGCAAGGA CAAGACCTTC GGTTTCGGTA CCGCCGTGCC GTTCGGCATG
AATGCCCGCC AGATGAACGC CTGGATCTAC TACGGTGGCG GTCAGAAAGT GCTCGACGAG
TTTTACGCCA ACTACAATGT TGTTTCCTTC GCTGGCGGCA ATACCGGTAC CCAGATGGGC
GGCTGGTGGC GCAAGGAAGT GAAAACCCTG GCCGACCTCA AGGGCGTCAA GATGCGTATC
GCCGGTCTGG GCGGCGCTGT CTTCTCCGAA CTCGGCGTTG TGCCGCAGCA GATCGCCGGT
GGCGACATCT ATCCGGCGCT GGAAAAGGGC ACCATTGATG CGGCCGAGTG GGTTGGTCCG
TACGATGATG AAAAGCTCGG CTTCTACAAG GTTGCCAAGA ACTACTACTA CCCGGGCTTC
TGGGAACCGG GTCCGACCAT CCACTTCTTC GTCAACAAGA AGGAATGGGA CAAGCTGCCG
AAGGAATATC AGGAGGCCTT CCAGGCCGCT GCCTACGAAG CCAACGTCAC CATGATGGCC
GAATACGATC ACAAGAACCC GATCGCCCTG TCCAAACTGC TGCAAAACGG CGTCAAGCTG
CATGCTTTCT CGGACGAAAT TCTTGAAGCG GCCTACAAGG CTTCGCAGCA GCTATACGCC
GATGAATCTG CCAAGAACCC GGCCTTCAAG AAGATTTACA CCGAATACGA GAAGTATCGC
AAGACGCAGA ATGCCTGGTT CAGCGTGGCT GAAATGCGCA TGGACCGCTT CCTGCAAACG
CACAAGTAA
 
Protein sequence
MQRRDFLKKA SIGAAAGAAT TLAAPAIAQS SPSIKWRLTS SFPKSLDTIY GGAEVLANRL 
RAMTGGKFDI RVFPGGEIVP GLQALDAVQQ GTVEVCHTCS YYYVGKDKTF GFGTAVPFGM
NARQMNAWIY YGGGQKVLDE FYANYNVVSF AGGNTGTQMG GWWRKEVKTL ADLKGVKMRI
AGLGGAVFSE LGVVPQQIAG GDIYPALEKG TIDAAEWVGP YDDEKLGFYK VAKNYYYPGF
WEPGPTIHFF VNKKEWDKLP KEYQEAFQAA AYEANVTMMA EYDHKNPIAL SKLLQNGVKL
HAFSDEILEA AYKASQQLYA DESAKNPAFK KIYTEYEKYR KTQNAWFSVA EMRMDRFLQT
HK