| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0551 |
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| Symbol | |
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| ID | 3568876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 610771 |
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| End bp | 613851 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637678994 |
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| Product | PAS |
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| Protein accession | YP_283778 |
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| Protein GI | 71906191 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.425664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATTT CGCCAACCCA CGCTCCGATC TGCGAAAAAC GCCCCTCCCC GGCGCGCTCC
GTATTTAGCG AAGGCGCCGC GTGGCTGGCA CTTGGGCTGA TCCTGGCTGT CACCGCCGCA
ATTTGCGCGC TGGTCCGCGA AACCACCGAA GAACAGATTT ACCAGCGCTT CCTTTACCGT
GCCGAGCAGC AGCGGAGCAA CATCCTTTTC CGGCTGGAGG CACACGCCCA GGTTCTGCGC
GGCGCAGCTG CGCTGTTCGA TGCCAGCGAG ACAGTAGACC GCCGCGAATG GCGGGATTAC
ATTGCCCACC TTCATCTCGC GAAAACTCTT CCCGGCATTC AGGGGATCGG TTTTTCGCTG
ATGGTCTCCC AGCGTGACAA GGCTGCTCAT GAACGCGCCA TGCGTGCCGA AGGCTTTCCG
GATTACGCCA TCACGCCGGC CGGTACGCGG GAGCGCTACA GCAGCATCAT CTATCTGGAG
CCATTCGCCG GTCGCAACCT GAAAGCATTC GGCTATGACA TGTTTGCCGA ACCGGTTCGC
CGGGACGCCA TGGAATATGC CAGGGATTAT GGCGAACCCG CCCTCTCCGG CAAGGTCACC
CTGGTTCAGG AAAACCAGCA AGACGTTCAG CCAGGCTTTC TCATTTACGT TCCCGTGTAT
CGCCCATCGA TGCCGCACGA AACGATCAAG GAGCGCCGTA CAGCGCTCCT TGGCTTCACC
TTCAGCCCAT TCCGCGCCGA GGATCTGATG CGCAGCGCGG TCAGCCGCGA CAACAAGGAC
GTCGAGATCG AGCTGTACGA CGGCGAGATC AGGCCGGAAC GCCTTCTCTT CGACTCCCAT
ATTGATCAGA GCAGTGCGTC GCAAGGTCGG CAGCAAGTAG AACTCCCCAT CGAATTCGGC
GGCCATCAAT GGATCGCCCT CTTCCGCAGC CGGCCTGAAT TCGACAGCAT CACTGCCTCG
CAACTGCCGA TCAGCATTGC CCTGATCGGC ACACTGATCG GCTTGATGAG CTTTTTCTGG
CTGCTCCGGA AAAACCGCTT TCAGCAAAGC ATCACCGCCT ACGCCGACCG ACTCGAAGAA
AACGAAACAC GTCTGCGCAC CCTGATCAAC ACGATGCCCG ACATCGTCTG CCTGAAGGAT
GGCGCCGGCC GGTGGACAGA AGCCAACACC TTGCTGCTTC GCCTGTTTGC GTTGGAAAGC
GTCGGCTATC AGGGAATGAC CGGCGGCGAG CTGGCGGCTG CAGGCCACTT CGACTACGCC
AGGCTGGCCG CGCTGGAAGC GTCGGATGAA CAAGTCTGGC TGAACGGAGA ACGACTGCAC
GACGAATTGA CCATCCCGGT CGAGGGTCAG CACGACCGTA TCTTCGACAT TGCCAAGGTT
CCCCTGTTCG CCGCGGATGG TTCCCGACAC GCGCTGCTCA CCGTCGGGCG CGACATTACC
GAACGCGTTG AAACGGAAAA GGCTTTGCGC TCAGCCGAAC GCAAGTTCCG GGGACTGATC
GAGCAATCGC TGGCCGGGGT CTACATCATT CAGGGCAGAT GTTTCCGCTA CGTCAACCCG
TACTTTGCCC GGATTTTCGG CTACGACTCG CCGGATGAAA TCATCGACCA GCCGCTGTTC
GAGGAGCTCG TCTCGCCACA AGACCGACAA ATGGTGGCCA ACAATGTCCG GCGACGCCTT
AACGGGGAGA TGGAAACCTT GCATTACAGC TTCGTCGGCC AGCGCAAGGA CGGTTCTCCG
GTCGACGTTG AAGTCTTCGG CACGAAGGTC GACTACGAGG ACCAACCGGC ACTGATCGGG
GTCGTCATCG ACATTACCGA GCGCAAGCAG GCCGAAGCCG AACTCAAACG CCATCGCGAA
AACCTTGAGG AACAGGTTAA CGCCCGCACC GCCGACCTGC TCCTCGCCAA GGAAGCCGCA
GAGGCGGCCA ACCGCGCAAA AAGCACCTTC CTGGCCAACA TGAGCCATGA ACTGCGTACG
CCAATGAATG CAATCATCGG CATGACGCAC CTGCTGATCC GCGGCAATGA AAACGCCAGT
CAACGCGAAA AACTGGCCAA GGTCAGCAAT GCGGCCGATC ATCTGCTGCA TCTCCTCAAC
GATATCCTCG ATCTGTCTAA GATCGAGGCC GAGCGCCTGA CGCTGGAAAA AATTCCGCTG
CGCATCAGCG ATATCGTCGC CAATGCGATC AGCATGGCTG GTGAAAAGAT CGCAGCCAAG
GGCTTGCAGT TCAATCAACA AATCAGCCCG CAACTGGTCA CGACCGAACT CATCGGCGAT
CCGCTTCGCC TGCGCCAGAT CCTGCTCAAC CTGCTCGACA ACGCCCTGAA ATTCACTGCC
CAGGGCAGCA TTTCGCTCAG CGCAAGCGTT ACCGATGAAA CATCAGAAAA CCTGACTATC
CGTATCTCGA TCGAAGATAC CGGAACCGGC ATTCCCGACG AGGCAAAGGA TCGAATATTT
GCCCCGTTCG AGCAGGTGGA TGGTTCAACC ACGCGCCAAC ACGGCGGCAC CGGACTCGGC
TTGAGCATCG TCAAGCAACT GATTCACCTG ATGCACGGCA AGATCGAAGT CAGCAGCACG
CCAGGCATTG GCAGCTGCTT CACGCTGACC GCACGGCTCG ACAAAGCCCC GTCCAAGCCA
CGGCATCAAG CCACGCCAGA AAGACCCGTT CGCGCCCCGC AACCCCTCAC CCTCGGGAAC
AAACAATTGC TGCTGGCGGA AGATGAACCG GTCAACCGCG AAGTCATGCT CGACCTGCTC
TCGGACATCC CTGGCCTGCG TGTCGACATT GCCGAGAACG GCGAGCGCGC CTTTGAACTG
GCCAGCACCC GGCACTACGA CCTGATCCTG ATGGACATGC AAATGCCGAA GATGGATGGT
CTGGAGGCCA CACGGGCGAT CCGCCAGCTA TCCGGCTATG CCGAAACCCC CATATTGGCC
ACGACCGCCA ATGTATTCAA CGAAGACCGG GAGCGCTGCA TCGAATCGGG GATGTCTGAC
TTCATCACCA AACCCGTTGA ACCTGGGCTG CTGTACACCA AGCTTTCATC CTGGCTTGCC
GCCAACAGCG GAGCTGACTG A
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| Protein sequence | MKISPTHAPI CEKRPSPARS VFSEGAAWLA LGLILAVTAA ICALVRETTE EQIYQRFLYR
AEQQRSNILF RLEAHAQVLR GAAALFDASE TVDRREWRDY IAHLHLAKTL PGIQGIGFSL
MVSQRDKAAH ERAMRAEGFP DYAITPAGTR ERYSSIIYLE PFAGRNLKAF GYDMFAEPVR
RDAMEYARDY GEPALSGKVT LVQENQQDVQ PGFLIYVPVY RPSMPHETIK ERRTALLGFT
FSPFRAEDLM RSAVSRDNKD VEIELYDGEI RPERLLFDSH IDQSSASQGR QQVELPIEFG
GHQWIALFRS RPEFDSITAS QLPISIALIG TLIGLMSFFW LLRKNRFQQS ITAYADRLEE
NETRLRTLIN TMPDIVCLKD GAGRWTEANT LLLRLFALES VGYQGMTGGE LAAAGHFDYA
RLAALEASDE QVWLNGERLH DELTIPVEGQ HDRIFDIAKV PLFAADGSRH ALLTVGRDIT
ERVETEKALR SAERKFRGLI EQSLAGVYII QGRCFRYVNP YFARIFGYDS PDEIIDQPLF
EELVSPQDRQ MVANNVRRRL NGEMETLHYS FVGQRKDGSP VDVEVFGTKV DYEDQPALIG
VVIDITERKQ AEAELKRHRE NLEEQVNART ADLLLAKEAA EAANRAKSTF LANMSHELRT
PMNAIIGMTH LLIRGNENAS QREKLAKVSN AADHLLHLLN DILDLSKIEA ERLTLEKIPL
RISDIVANAI SMAGEKIAAK GLQFNQQISP QLVTTELIGD PLRLRQILLN LLDNALKFTA
QGSISLSASV TDETSENLTI RISIEDTGTG IPDEAKDRIF APFEQVDGST TRQHGGTGLG
LSIVKQLIHL MHGKIEVSST PGIGSCFTLT ARLDKAPSKP RHQATPERPV RAPQPLTLGN
KQLLLAEDEP VNREVMLDLL SDIPGLRVDI AENGERAFEL ASTRHYDLIL MDMQMPKMDG
LEATRAIRQL SGYAETPILA TTANVFNEDR ERCIESGMSD FITKPVEPGL LYTKLSSWLA
ANSGAD
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