Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0524 |
Symbol | |
ID | 3567353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 584279 |
End bp | 585427 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637678966 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_283751 |
Protein GI | 71906164 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCTGTC GCAAACTTTC CTCTTTAGCC CTGCTGCTGT TGGCAAGCAC CGTCGCGCTG GCGGACATCC GAATTGGCGT GATCGCCTCG TCAACCGGCC CGACCGCTGT CGTCGGCATT CCGCAAAAGA ACACGGTCGC CCTGTTACCG ACCGAAATCG GCGGCCAGAA AGTCGAGTAC ATCGTCCTCG ATGATGCGTC CGACCCGACC AATGCCGTCA CTGGCGTCAA GAAGCTGATC TCCGAACACA AGGTCGATGC GCTGATCGGG CCGACCACGA CGCCGGCGGC GCTGGCCATG CTCGATTTCG TGGCCGAATC CCGCGTCCCC CTGGTCACCA CGGTAGGTTC ATCGGCCATC ATCCTGCCGC TCGATGACAA GCGTCGTTGG GTATTCAAGA CGACCCAGAA CGATGACCTG ATCGCTGGTG CACTGATCGA GCACATGTTG GCGGCCGGCA CGAAGACGGT CGGTTTTATC GGCTTCAACG ACCCCTACGG CGAAAACTGG TTCAAGGTGT TCACCGCCAT GGCCGAGAAA TCCGGCCTGA AGATGGTCGC CAGCGAACGC TTCAACCGGA CTGATCAATC GGTCACTGGA CAGGCACTGA AAGTCATGAC CAGCAAGCCG GATGCCGTGC TGATCGCAGC GACGGGTGGT CCGGCCGTTC TGCCGCAAAC AACGTTGCAG GAAAAGGGCT ACAAGGGCCG CATCTACCAG ACGCACGGCG TGGCGACCAA CGACTTCATC CGCATCGGCG GCAAGGCCGT CGAGGGCACG CTGATGGCCG GCGGCCCGAT GCTGGTGGCG GCCGACCTGG CCGGCAACAA CCCGATCAAG GCCGTCGCCC TGGGCTACGT CAAGGCCTAC GAGGGCAAAT ACGGCGCCGG CACGATGTCC ACCTTCGGTG CCAACACCTA CGACGCTGGC CTGCTGCTGC AGAAGGCGAT CCCGGCCGCC CTGAAGAAGG CCAAGCCCGG CTCGGTGGAA TTCCGCGAAG CCCTGCGCGA TGCGCTGGAG CAATCGAAGG AAGTGGTCGG CGCTCAGGGC ATCTTCAACA TGAACGCGCA GAACCATAAC GGCATGGACG CGCGCGCCCG CGTCATGATG GCCGTCAAGG ACGGCAAGTG GGTGCTGCTC AAGGACTGA
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Protein sequence | MLCRKLSSLA LLLLASTVAL ADIRIGVIAS STGPTAVVGI PQKNTVALLP TEIGGQKVEY IVLDDASDPT NAVTGVKKLI SEHKVDALIG PTTTPAALAM LDFVAESRVP LVTTVGSSAI ILPLDDKRRW VFKTTQNDDL IAGALIEHML AAGTKTVGFI GFNDPYGENW FKVFTAMAEK SGLKMVASER FNRTDQSVTG QALKVMTSKP DAVLIAATGG PAVLPQTTLQ EKGYKGRIYQ THGVATNDFI RIGGKAVEGT LMAGGPMLVA ADLAGNNPIK AVALGYVKAY EGKYGAGTMS TFGANTYDAG LLLQKAIPAA LKKAKPGSVE FREALRDALE QSKEVVGAQG IFNMNAQNHN GMDARARVMM AVKDGKWVLL KD
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