Gene Daro_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0524 
Symbol 
ID3567353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp584279 
End bp585427 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content63% 
IMG OID637678966 
Productextracellular ligand-binding receptor 
Protein accessionYP_283751 
Protein GI71906164 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCTGTC GCAAACTTTC CTCTTTAGCC CTGCTGCTGT TGGCAAGCAC CGTCGCGCTG 
GCGGACATCC GAATTGGCGT GATCGCCTCG TCAACCGGCC CGACCGCTGT CGTCGGCATT
CCGCAAAAGA ACACGGTCGC CCTGTTACCG ACCGAAATCG GCGGCCAGAA AGTCGAGTAC
ATCGTCCTCG ATGATGCGTC CGACCCGACC AATGCCGTCA CTGGCGTCAA GAAGCTGATC
TCCGAACACA AGGTCGATGC GCTGATCGGG CCGACCACGA CGCCGGCGGC GCTGGCCATG
CTCGATTTCG TGGCCGAATC CCGCGTCCCC CTGGTCACCA CGGTAGGTTC ATCGGCCATC
ATCCTGCCGC TCGATGACAA GCGTCGTTGG GTATTCAAGA CGACCCAGAA CGATGACCTG
ATCGCTGGTG CACTGATCGA GCACATGTTG GCGGCCGGCA CGAAGACGGT CGGTTTTATC
GGCTTCAACG ACCCCTACGG CGAAAACTGG TTCAAGGTGT TCACCGCCAT GGCCGAGAAA
TCCGGCCTGA AGATGGTCGC CAGCGAACGC TTCAACCGGA CTGATCAATC GGTCACTGGA
CAGGCACTGA AAGTCATGAC CAGCAAGCCG GATGCCGTGC TGATCGCAGC GACGGGTGGT
CCGGCCGTTC TGCCGCAAAC AACGTTGCAG GAAAAGGGCT ACAAGGGCCG CATCTACCAG
ACGCACGGCG TGGCGACCAA CGACTTCATC CGCATCGGCG GCAAGGCCGT CGAGGGCACG
CTGATGGCCG GCGGCCCGAT GCTGGTGGCG GCCGACCTGG CCGGCAACAA CCCGATCAAG
GCCGTCGCCC TGGGCTACGT CAAGGCCTAC GAGGGCAAAT ACGGCGCCGG CACGATGTCC
ACCTTCGGTG CCAACACCTA CGACGCTGGC CTGCTGCTGC AGAAGGCGAT CCCGGCCGCC
CTGAAGAAGG CCAAGCCCGG CTCGGTGGAA TTCCGCGAAG CCCTGCGCGA TGCGCTGGAG
CAATCGAAGG AAGTGGTCGG CGCTCAGGGC ATCTTCAACA TGAACGCGCA GAACCATAAC
GGCATGGACG CGCGCGCCCG CGTCATGATG GCCGTCAAGG ACGGCAAGTG GGTGCTGCTC
AAGGACTGA
 
Protein sequence
MLCRKLSSLA LLLLASTVAL ADIRIGVIAS STGPTAVVGI PQKNTVALLP TEIGGQKVEY 
IVLDDASDPT NAVTGVKKLI SEHKVDALIG PTTTPAALAM LDFVAESRVP LVTTVGSSAI
ILPLDDKRRW VFKTTQNDDL IAGALIEHML AAGTKTVGFI GFNDPYGENW FKVFTAMAEK
SGLKMVASER FNRTDQSVTG QALKVMTSKP DAVLIAATGG PAVLPQTTLQ EKGYKGRIYQ
THGVATNDFI RIGGKAVEGT LMAGGPMLVA ADLAGNNPIK AVALGYVKAY EGKYGAGTMS
TFGANTYDAG LLLQKAIPAA LKKAKPGSVE FREALRDALE QSKEVVGAQG IFNMNAQNHN
GMDARARVMM AVKDGKWVLL KD