Gene Daro_0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0521 
Symbol 
ID3567350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp581892 
End bp582392 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content66% 
IMG OID637678963 
Productsigma-70 region 2:sigma-70 region 4 
Protein accessionYP_283748 
Protein GI71906161 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAGCC GCGCCATCCT CGCCGAACTG CCCCGCCTGC GCCGTTACGC GCGGGCGATG 
CTCGGCGACC GTGCGGCGGC GGACGACCTC GTGCAAGACA CTCTGGAACG CGCCTGGAGC
CGGATTAGCC AATGGCGCCA GGGCAGCGAC CTGCGCGCCT GGCTGTTCGG CATCATGCAC
AACCTGCGCA TCGACCAGTT GCGGCGTGCC GGCCTGGCAA TCACGTCGTT GGATGAGGAC
GCTGCCGAGG TGCCGCTCCG CCCGACGCAG ACTGACCGGC TCGAACTGAT GGACCTCGAA
TCTGCGCTCC GCCAATTGCC CGACGAGCAA CGCGAAATCC TGCTGCTGGT CGCACTGGAA
GAAATGAGCT ACGCCGATAT TGCCACCCTG CTCGGCATTC CCATCGGCAC CGTGATGTCC
CGCCTGTCGC GCGGGCGAGA AAGGCTGCGT GTGGTCATGG ATGGCCGCCA GCAAACAGCA
AACCTGAGGC TCGTACGATG A
 
Protein sequence
MDSRAILAEL PRLRRYARAM LGDRAAADDL VQDTLERAWS RISQWRQGSD LRAWLFGIMH 
NLRIDQLRRA GLAITSLDED AAEVPLRPTQ TDRLELMDLE SALRQLPDEQ REILLLVALE
EMSYADIATL LGIPIGTVMS RLSRGRERLR VVMDGRQQTA NLRLVR