Gene Daro_0489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0489 
Symbol 
ID3570213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp551476 
End bp552276 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content62% 
IMG OID637678931 
ProductGTP cyclohydrolase 
Protein accessionYP_283716 
Protein GI71906129 
COG category[S] Function unknown 
COG ID[COG1469] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00294] conserved hypothetical protein TIGR00294 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value0.427836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCC CGGAAAACAT CTTTCTGCCC GACGTCCAAG CCGCCGCCGA TACGCGCCGC 
CTCGCCATCC AGAGCGTCGG CGTCAAGGGC TTGCGCTATC CCCTGCAACT GGAAAATGCG
GCCGGTGAAT TGACCAGCAC GGTCGCGACC TTTGCGATGA GCGTCGGCTT GCCGCCTGAG
GTCAAGGGCA CGCACATGTC ACGTTTCGTC GAGTTGCTCG AAGCCCGCAC TGGCCCTCTG
ACGCAAGTCG GCCTGCTGCG CATGATGGCC GACATGCTGC TGCGTCTGGA TGCCAGCAGT
GGCCGCATTG AACTGGCTTT CCCTTACTTC ATCCGCAAGA TGGCGCCGGT CTCCGGTGTC
GAGAGCCTGC TCGACTACGA TGCGACGCTG ATCGTCGATC AGCGCGCATG GGAAAGCGCA
ACGTTGACCC TGCGCGTCGT GGCGCCGGTA ACCAGCCTGT GCCCCTGCTC CAAGAAGATT
TCCGATTACG GCGCCCACAA CCAGCGTTCG CATATCACGC TGGAGGCGCG ACTGCGTTCG
CCAATGAGCA TCGAGGATCT GGTGCGTATT GCCGAGGAAG AGGCGTCCTG CGAGGTCTTC
GGCCTGTTGA AGCGGCCGGA CGAAAAGTGG GTGACCGAGC GTGCCTACGA CAACCCGAAG
TTCGTCGAAG ACCTCGTCCG CGACATCGCG CTGCGCCTGA TGAACGAGCC GCGCATCGCC
GAATGGAAGG TGGCTTCCGA GAACTTCGAG TCCATCCACA ACCACTCGGC CTACGCCGAA
CTGTACGGCT GCAATGAGTA A
 
Protein sequence
MNAPENIFLP DVQAAADTRR LAIQSVGVKG LRYPLQLENA AGELTSTVAT FAMSVGLPPE 
VKGTHMSRFV ELLEARTGPL TQVGLLRMMA DMLLRLDASS GRIELAFPYF IRKMAPVSGV
ESLLDYDATL IVDQRAWESA TLTLRVVAPV TSLCPCSKKI SDYGAHNQRS HITLEARLRS
PMSIEDLVRI AEEEASCEVF GLLKRPDEKW VTERAYDNPK FVEDLVRDIA LRLMNEPRIA
EWKVASENFE SIHNHSAYAE LYGCNE