Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0473 |
Symbol | |
ID | 3569138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 531202 |
End bp | 534027 |
Gene Length | 2826 bp |
Protein Length | 941 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637678915 |
Product | excinuclease ABC subunit A |
Protein accession | YP_283700 |
Protein GI | 71906113 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.78914 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCA TCCGCATCCG CGGTGCGCGC ACCCACAATT TAAAGAACAT CAACCTCGAC CTGCCGCGTG ATCAGTTGAT CGTGATCACC GGACTATCCG GCTCCGGCAA GTCCTCCCTG GCCTTCGACA CCTTGTACGC CGAGGGACAG CGCCGTTATG TCGAATCGCT GTCGGCCTAT GCCCGGCAGT TCCTGCAGTT GATGGAGAAA CCGGATGTCG ATCTGATCGA AGGCCTGAGC CCGGCCATTT CCATCGAACA GAAGGCGACC TCGCACAACC CACGGTCGAC GGTCGGCACC GTGACTGAAA TTCACGACTA CCTGCGCCTG CTCTTCGCCC GCGCCGGCAC GCCGTACTGC CCGGACCACA ACCAGCCGCT GGAAGCGCAA ACCGTGTCGC AGATGGTCGA CACCGTGCTC GCCCTGCCGG CCGAAACCAA GCTGATGATC CTCGCCCCGG TCGTTGCCAA CCGCAAGGGC GAACAAGTCG ACCTGTTCAC CGAATTGCGC GCCCAAGGCT TTGCCCGCGT CCGTGTCGAT GGCACGGTCT ATGAGATCGA TGCCGTACCC AAGCTGGCCA AGACCCAGAA ACACACCGTC GACGTCGTCG TCGACCGCCT GAAGGTGCGT GACGACATGC GCCAGCGCCT GGCCGAATCC TTTGAAACAG CGCTGCGCCA TGCCGAGGGC CGAGCCATCG CGCTGGAAAT GGACAGCAAC GTCGAGCATC TTTTTTCGGC CAAGTTCGCC TGCCCGGTCT GTTCCTACGC CTTGCAGGAA CTGGAACCGC GCCTGTTCTC GTTCAACAAC CCGATGGGCG CCTGCCCGAA GTGCGACGGC CTGGGCGTCA TCCAGTTCTT CGACCCGAAA CGGGTGGTCA CCCAACCAAC CGCTTCGCTG GCCGGCGGCG CGATTCGCGG CTGGGACAAG AAGAACCAGT TCTACTTCCA GATCATCGAA TCGCTGGCCG ACCATTACGG TTTTTCGGTC GATACGCCAT GGAACGACTT GCCGGAAAAG GTCCAGCAAC TGGTCCTTTA CGGCTCAGGC AACGTGGCCA TCAACTTCCG CTACCTGAAC GAGAAGGGCA CCCGCTTCGA CCGCAGCCAC AGCTTCGAAG GCATCATCCC GAACCTGGAA CGGCGCTACC GCGGCAGCGA ATCGAACGCC GTGCGCGAGG AGTTGGCGAA GTACGTCAGC AGTTCGGCCT GCCCGAGCTG CGCCGGCACC CGGCTGCGCA TTGAGGCACG GCATGTTCGG GTCGGCGACA AGACCCTGTA TGAAATCAGC CGGATGCCGC TTGGCGAGGC GCGCAATTAT TTCAACTGCC TGACGCTGAC CGGCGCCAAG GCACAGGTGG CCGACAAGAT CCTCAAGGAA ATCACCGCCC GCCTGAGCTT CCTGATCAAC GTCGGCCTCG ATTACCTGTG CCTCGAGCGC TCGGCCGAAA CGCTGTCCGG CGGCGAGGCG CAGCGCATCC GGCTGGCCTC GCAGATCGGC TCGGGCCTGA CCGGCGTCAT GTATGTACTC GACGAACCCT CAATCGGTCT GCACCAGCGC GACAATGATC GTCTGCTCGA AACATTGAAG AACCTGCGCG ACATGGGCAA CACGGTATTG GTCGTCGAGC ATGACGAGGA TGCCATCCGC GCCGCCGACT ACGTCGTCGA CATCGGCCCT GGCGCCGGGG TGCATGGCGG TTTCATCGTT GCCCAGGGGA CGCCGGCCGA GGTTCAGGCC AATCCGCTAT CGATGACTGG CGATTACCTG TCCGGCCGCA AATCCATTTC TGCCCCGAAA ACGCGCCGGG TGCCGGATCC GAACAAGCAG CTCAAGGTCG TCGGCGCCTA CGGCAACAAT CTGAAGGACG TCACGCTGGA AATCCCCGGC GGCCTGCTTA CCTGCATCAC CGGTGTTTCC GGCTCGGGCA AATCGACGCT GATCAACGAC ACGCTGTACG CGGCGGCCGC CAGACACCTC TACGGCTCGA CCACGGAACC CGCACCACAC AAGGAAATCA TCGGTCTGGA GCTGTTCGAC AAGGTAATCA ACGTCGACCA GGCGCCGATT GGCCGCACGC CGCGCTCCAA CCCGGCGACC TACACCGGCC TGCTGACGCC GATCCGCGAG CTGTTCGCCC AGGTACCCGA ATCCCGCGTC CGCGGCTACG GGCCGGGACG CTTCAGCTTC AACGTCAAGG GCGGACGCTG CGAGGCCTGC CAGGGCGACG GCATGATCAA GGTGGAGATG CACTTCCTGC CCGATATCTA CGTCCCCTGC GACGTCTGCC ACGGCAAGCG CTACAACCGC GAAACGCTGG AAGTCCAGTA CAAGGGCAAG AACATTTACG ACATTCTCGG CATGACCGTC GAGCAGGCGC GAGAGTTCTT CGACCCCGTC CCCAACATCG CGCGCAAGCT GCAAACACTG GTCGATGTCG GCCTCAGCTA CATCACCCTG GGCCAGAGCG CGACCACGCT GTCCGGCGGC GAAGCCCAGC GCGTCAAGCT CGCCCTTGAA CTGTCCAAGC GCGATACCGG CCGCACGCTG TATATCCTCG ACGAGCCGAC CACCGGCCTG CATTTCCAGG ACATCGAAAT GCTGCTCAGC GTCCTGCAGC GTCTGGCCAA CAACGGCAAC ACCATCGTCG TCATCGAACA CAACCTCGAC GTCATCAAGA CCGCCGACTG GATCGTCGAT CTCGGGCCGG AGGGCGGCGA TGGCGGGGGC CGCATCCTGG TCAGCGGCAC GCCTGAAGAA GTGGCCAAAT GCAAGGCCAG CCATACCGGG CGCTTCCTGA AACCTTTGCT TGAGAAAAAG AAATGA
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Protein sequence | METIRIRGAR THNLKNINLD LPRDQLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY ARQFLQLMEK PDVDLIEGLS PAISIEQKAT SHNPRSTVGT VTEIHDYLRL LFARAGTPYC PDHNQPLEAQ TVSQMVDTVL ALPAETKLMI LAPVVANRKG EQVDLFTELR AQGFARVRVD GTVYEIDAVP KLAKTQKHTV DVVVDRLKVR DDMRQRLAES FETALRHAEG RAIALEMDSN VEHLFSAKFA CPVCSYALQE LEPRLFSFNN PMGACPKCDG LGVIQFFDPK RVVTQPTASL AGGAIRGWDK KNQFYFQIIE SLADHYGFSV DTPWNDLPEK VQQLVLYGSG NVAINFRYLN EKGTRFDRSH SFEGIIPNLE RRYRGSESNA VREELAKYVS SSACPSCAGT RLRIEARHVR VGDKTLYEIS RMPLGEARNY FNCLTLTGAK AQVADKILKE ITARLSFLIN VGLDYLCLER SAETLSGGEA QRIRLASQIG SGLTGVMYVL DEPSIGLHQR DNDRLLETLK NLRDMGNTVL VVEHDEDAIR AADYVVDIGP GAGVHGGFIV AQGTPAEVQA NPLSMTGDYL SGRKSISAPK TRRVPDPNKQ LKVVGAYGNN LKDVTLEIPG GLLTCITGVS GSGKSTLIND TLYAAAARHL YGSTTEPAPH KEIIGLELFD KVINVDQAPI GRTPRSNPAT YTGLLTPIRE LFAQVPESRV RGYGPGRFSF NVKGGRCEAC QGDGMIKVEM HFLPDIYVPC DVCHGKRYNR ETLEVQYKGK NIYDILGMTV EQAREFFDPV PNIARKLQTL VDVGLSYITL GQSATTLSGG EAQRVKLALE LSKRDTGRTL YILDEPTTGL HFQDIEMLLS VLQRLANNGN TIVVIEHNLD VIKTADWIVD LGPEGGDGGG RILVSGTPEE VAKCKASHTG RFLKPLLEKK K
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