Gene Daro_0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0471 
Symbol 
ID3569136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp529155 
End bp530822 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content62% 
IMG OID637678913 
Productphosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase 
Protein accessionYP_283698 
Protein GI71906111 
COG category[R] General function prediction only 
COG ID[COG2194] Predicted membrane-associated, metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.882488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGAC TGCTGGATGC GCTTCTTCGC TTCGGACAAC GCCTGGCCGG CGGGCAGGTG 
ATCGCCTCCA TCGAGACGGT GACGCTGCTG GTCAGCCTGT TCTTTGCCCT GTTCTGCAAT
CAGCTTTTCC TGCGTGGCAT GCTGGCCGGC TACGACATGG CGCAGCCGGG AAGCTGGCTG
CTGGCAGGCT CGCTGCTGGT CGGTCTGGCT GCCGTGCATT TCATCATGCT CAGCCCTTTC
ATGACACGGT GGACAACCAA ACCGCTGCTG GCCCTGCTGC TCGTCGCGAC GGCCTTCGCC
GTTCACTTCA TGACGCGCTA CAAGGTCTAT CTCGACACCA ACATGCTGCG CAATGTGCTG
GCGACCGATG TCCGGGAAGC GCGCGACCTG ATGACCTGGT CGCTGATTCC ACAACTGCTG
CTCTACGCGG CACTCCCCTT GTGGCTGCTC AGCCGTCTCC GCCTCAAGCA GCGCACCGTC
GGCCGGGCGC TGCTGGTTCG TCTCGGTTCA ATCGTGCTGG CCCTGCTCGT GCTGGGCGGT
GCCATTTTCC TGAATTTTCA GGATATCGCC TCACTGATGC GCAACAACCG GGAGTTCCGC
TTCCTGGTGA CGCCGGCCAA TTACCTCTAT TCGCTGGTTC AGGTGAGCCG TAGTCAGGCG
CTGGCCGTCG AGGCCGCGCG CGAACCGGTC GGCGCCGATG CGCAGCCCGG CCCCGGCTGG
AAAAATCGCG ACAAGCCGGT GGTCATGGTC ATGGTCCTTG GCGAAACAGT ACGTGCCGCC
AATTGGGGCT TGTCCGGGTA TGCGCGCCAG ACCACGCCGG AGTTGGCCGC CGAGGCCGGC
ATTATCAACT TCGCCGACGT GACCAGTTGT GGCACCGATA CCGAAACCTC GCTGCCCTGC
ATCTTTTCGC CCTGGGGGCG GCGAAAATAT GATGAGGCGC GCATCCGGAA CAGCGAGTCG
GTGCTTGATG TCGTCGCCCG GGCCGGCTTC CGTGTCGTCT GGGTGGATAA CCAGTCGGGC
TGCAAGGGGG TCTGCAAGGG CGTCGAATCG ATTCGTCCCG ATCTGGCCAA GTCACCGGAC
CATTGTTTTG GCGGCGAGTG TCAGGATGGC GCGCTGGTCG ATTCCCTGAA ACAACTGGTC
GACGAAACGC CGGGCAACCT GATGATCGTC CTGCACCAGA TGGGTAATCA CGGGCCGGCC
TATTTCAAGC GCTATCCGGA TGAGTTCAAA GCTTTCAAGC CGGCCTGCGA GGATCCCGAT
CTGCCGCATT GCTCGGAGGA CAGCATCGTC AACGCCTACG ACAATGCGAT TCGCTATACC
GATCATGTGC TCGCCTCGCT GGTCCGCACG CTGCGCGACC ATCAAAGCCA CGACTCGGCG
CTGCTCTACG TGTCGGATCA CGGCGAATCG CTGGGCGAAA AAGGCCTGTT CCTGCACGGT
GTGCCCTACA AGATTGCCCC GGAAGTGCAG ACCAAGGTGC CCATGGTGAT GTGGTTTTCG
CCGGGCTTCG CGCCAAGCTT TGCGCTGGAT ACGGCCTGCC TTGGCAAGGT CGCCGCCTCG
CCACAGTCGC ATGACAATCT GTTCCACACC TTCCTTGGTC TGCTCGACGT GAAGACCAGC
GTTTACGCGC CGGAAATGGA CTTCTCGGCC AAGTGTCGCA AGGGCTGA
 
Protein sequence
MRRLLDALLR FGQRLAGGQV IASIETVTLL VSLFFALFCN QLFLRGMLAG YDMAQPGSWL 
LAGSLLVGLA AVHFIMLSPF MTRWTTKPLL ALLLVATAFA VHFMTRYKVY LDTNMLRNVL
ATDVREARDL MTWSLIPQLL LYAALPLWLL SRLRLKQRTV GRALLVRLGS IVLALLVLGG
AIFLNFQDIA SLMRNNREFR FLVTPANYLY SLVQVSRSQA LAVEAAREPV GADAQPGPGW
KNRDKPVVMV MVLGETVRAA NWGLSGYARQ TTPELAAEAG IINFADVTSC GTDTETSLPC
IFSPWGRRKY DEARIRNSES VLDVVARAGF RVVWVDNQSG CKGVCKGVES IRPDLAKSPD
HCFGGECQDG ALVDSLKQLV DETPGNLMIV LHQMGNHGPA YFKRYPDEFK AFKPACEDPD
LPHCSEDSIV NAYDNAIRYT DHVLASLVRT LRDHQSHDSA LLYVSDHGES LGEKGLFLHG
VPYKIAPEVQ TKVPMVMWFS PGFAPSFALD TACLGKVAAS PQSHDNLFHT FLGLLDVKTS
VYAPEMDFSA KCRKG