| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0446 |
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| Symbol | |
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| ID | 3568358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 489783 |
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| End bp | 491657 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637678887 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_283673 |
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| Protein GI | 71906086 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.00317389 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.905596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCAG TCATGCCCGC ACCGGCAGCA AGCCGGGTTC TGATGTCAGG TAATGAAGCG
GTCGCCCGCG CGGTCTGGGA GTCCGGCGTC AAGGTCGCTG CGGCTTATCC CGGCACACCG
TCGACCGAGA TGCTGGAAGT GATCTCGACC TATCCGGATC TCTACGCCGA GTGGTCGGTC
AATGAGAAGG TCTCGCTCGA AGTCGCCATC GGCGCCGCCT ACGCTGGCTC GCGTTCATTC
TGCTGCATGA AGCATGTCGG TATGAACGTT GCCTCCGATG CGCTGATGAC GCTGACCCTG
ACCGGCGTGG TCGGTGGCCT GGTGATCGCC ATCGCCGACG ATGTCGGCTT GTCTTCCTCG
CAGAACGAGC AGGATTCCCG TTACTGGGGC CGCTTCGCGC ATGTGCCGGT GTTCGAGCCG
GCCGATTCGC AGGAAGCCTA CGAAATGACC AAGCTCGCCT ATGAGCTGTC CGAGAAATTC
CAGGTGCCGG TCATCCTGCG CATGACGACC CGGATCAATC ACGTCAAGTC ACTGGTCACG
GTCGGCGAGC GGAATGAGTA CGTCGGTGCT GGTTTCAAGA AGGAGCCGGC CCGTTTCGTG
ATGGTGCCGG GCAACGCCGG CAAGCGTATT CCGCTGATGT TCCAGCGCGA TATCGCCTTG
CGTGCCGAGG CTGAAAAGTC GGCCCTGAAT TTCATCGAAC CCGGTTCCGA CAAGCGCGTC
GGCTTTATCG CCTCCGGTCC GGCCTACATG CACGTCAAGG AATCCTTCCC CAACGCGCCG
GTCCTCAAGC TTGGCTTTTC CTGCCCGGCG CCGTTCGAGA AGTGCCGCGA ACTGGCGGCC
ATGGTCGAGC AGGTGGTGAT CGTCGAGGAA GTCGAACCGC TGATTGAAAC CGAACTGAAA
GCCCAGGGCC TGAAGGTCAT TGGCAAGGAA ATCCTGCCGC TGCAGGGCGA GTTGTCGCCG
AACGTGTTGA AGCCGGCCAT CGCCAAATTG CTCGGCGAAC CCGTGCCGGT GATGGACTCC
GTGGTCCCGA TGAAGGTTTT CCCCCGGCCG CCGACCATGT GCGTCGCCTG TCCGCACCTC
GGCGTCTATT ACACGCTGTC GCAAGTGCGC AACCTTAACA TTTCCGGCGA CATCGGCTGC
TACACGCTGG GTGCCGGCCA TCCGTGGAAC GCGCTTGATA CCTGCGTGTC GATGGGCGCC
TCGATGGGCG TCGCGCTGGG CATGGACAAG GGGCGCGGCG AGGCCGACAA GGACAAGCGG
ATCGTCGCCG TGATCGGCGA TTCCACCTTC CTGCACATGG GCATGCAAGG CCTGCTCGAC
ATGGTCTACA ACAAGGGCAA CGTCACCGTG CTGCTGCTCG ACAACCGGGC TGTTGGCATG
ACCGGTGGTC AGGACAACCC GGGCAACGGC CGCGACATCT ACGGTGACGA TTCGCCGCGC
GTTGATTTCG CCAAGCTGGT GTCGGCGCTC GGCGTCAAGG AAGAGCGCAT TCACAAGGTT
AACCCGTACG AGTTGCCGGT ACTGTTCAAG ACTATTCGCG ACGAAGTGAA GGTGCCGGAC
GTTTCGGTGA TCATCACCGA CCAGCCCTGT GTGCTGATCA AGGATTACCA CAAGCTGAAA
CCCTTCGAAG TGATCGAGGA CAAGTGCACC GGCTGCGGCA ACTGTATCGA TGTCGGCTGC
CCGGCCATCC ACGTCACGCG GCGTGCCAAG GAAGTGAAGC CGAGCGGCCG CGAGGTCGAC
CTCGCCTTCG TCCGTATCGA AAGCTCGGTT TGTACTGGCT GCACCCTCTG CGTCCAGCCC
TGTGCGCCGG GTGCCATCGT GCATTACGCC CCGGTCTCGC CAATTAAACT GGTCACGAAG
GGCTGTTCAG CATGA
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| Protein sequence | MAAVMPAPAA SRVLMSGNEA VARAVWESGV KVAAAYPGTP STEMLEVIST YPDLYAEWSV
NEKVSLEVAI GAAYAGSRSF CCMKHVGMNV ASDALMTLTL TGVVGGLVIA IADDVGLSSS
QNEQDSRYWG RFAHVPVFEP ADSQEAYEMT KLAYELSEKF QVPVILRMTT RINHVKSLVT
VGERNEYVGA GFKKEPARFV MVPGNAGKRI PLMFQRDIAL RAEAEKSALN FIEPGSDKRV
GFIASGPAYM HVKESFPNAP VLKLGFSCPA PFEKCRELAA MVEQVVIVEE VEPLIETELK
AQGLKVIGKE ILPLQGELSP NVLKPAIAKL LGEPVPVMDS VVPMKVFPRP PTMCVACPHL
GVYYTLSQVR NLNISGDIGC YTLGAGHPWN ALDTCVSMGA SMGVALGMDK GRGEADKDKR
IVAVIGDSTF LHMGMQGLLD MVYNKGNVTV LLLDNRAVGM TGGQDNPGNG RDIYGDDSPR
VDFAKLVSAL GVKEERIHKV NPYELPVLFK TIRDEVKVPD VSVIITDQPC VLIKDYHKLK
PFEVIEDKCT GCGNCIDVGC PAIHVTRRAK EVKPSGREVD LAFVRIESSV CTGCTLCVQP
CAPGAIVHYA PVSPIKLVTK GCSA
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