Gene Daro_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0426 
SymbolgroEL 
ID3567672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp468734 
End bp470386 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content60% 
IMG OID637678866 
Productchaperonin GroEL 
Protein accessionYP_283653 
Protein GI71906066 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000639435 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00144357 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGCTA AAGAAGTCAA ATTCGGTGAT TCCGCCCGCG CCCGCATGGT CGAAGGCATC 
AACATCCTGG CAGACGCAGT CAAGGTTACC CTCGGCCCCA AGGGTCGCAA TGTCGTGCTC
GAGCGCTCCT TCGGCGGCCC GACCGTCACC AAGGACGGCG TTTCTGTCGC CAAGGAAATC
GAACTGAAAG ACAAGTTCGC CAACATGGGC GCCCAGATGG TCAAGGAAGT CGCTTCCAAG
ACCTCCGATA TCGCCGGTGA TGGCACCACG ACCGCCACTG TGCTGGCCCA GTCCATCGTT
CGCGAAGGCA TGAAGTTCGT TGCCGCCGGC ATGAACCCGA TGGACCTGAA GCGCGGTATC
GACAAGGCTG TGGTTGCCAC CATCGCTGAA CTGCAGGCTT TCTCCAAGCC CTGTACGACC
ACCAAGGAAA TCGCCCAGGT TGGCTCCATT TCCGCCAACT CCGATTCCGA CATCGGCGAA
ATCATCGCCA ATGCCATGGA AAAGGTCGGC AAGGAAGGCG TCATCACCGT TGAAGACGGC
AAGTCCCTGG CCAACGAACT GGACGTCGTC GAAGGTATGC AATTCGACCG CGGCTACCTG
TCCCCGTACT TCATCAACAA CGGTGACAAG CAGCAAGCCC TGCTCGAAAA CCCGTTCGTC
CTGCTCTTCG ACAAGAAGAT CTCCAACATC CGCGACCTGC TGCCGATCCT GGAACAAGTT
GCCAAGGCCG GCCGTCCGCT GCTGATCATC GCTGAAGATG TCGATGGCGA AGCCCTGGCT
ACCCTGGTCG TCAACAACAT CCGTGGCATC CTGAAGACCG TTGCCGTCAA GGCTCCTGGC
TTCGGCGATC GTCGCAAGGC CATGCTGGAA GACATCGCTA TCCTGACCGG CGGTACCGTC
ATCGCTGAAG AAACCGGCCT GACGCTGGAA AAGGCTGTCC TGAAGGATCT GGGCCAGGCC
AAGCGCATCG AAGTCGCCAA GGAAAACACC ACCATCATCG ACGGTGCCGG CGAAGCTGCT
GCCATCGAAG CTCGCGTCAA GCAGATCCGT ATCCAGATCG AAGAAGCGAC CTCCGATTAC
GACAAGGAAA AGCTGCAGGA ACGTGTTGCC AAGCTGGCTG GCGGCGTTGC CGTCATCAAG
GTCGGCGCAG CTACCGAAGT CGAAATGAAG GAAAAGAAGG CCCGCGTTGA AGATGCCCTG
CACGCTACCC GCGCTGCTGT GGAAGAAGGT ATCGTCGCCG GCGGCGGCGT TGCCCTGATC
CGTGCCCGCG CTGCCGTTGG CAAGCTGAAG GGTGACAACC ACGATCAGGA TGCCGGCATC
AAGATCGTTC TCCGTGCCAT GGAACAGCCG CTCCGCGAAA TCGTTGCCAA CGCTGGCGAC
GAGCCGTCGG TCGTGGTCGA CAAGGTGCAG CGTGGCAAGG GTAACTACGG TTACAACGCT
TCCACCGGCG AGTACGGCGA CATGGTTGAA ATGGGCGTGC TGGACCCGAC CAAGGTCACC
CGCACCGCAC TGCAGAACGC CGCTTCCGTA GCCGGCCTGA TGCTGACCAC CGAATGCATG
GTTGCTGAGC TGGCTGAAGA CAAGCCGGCC GGCGGCATGC CTGACATGGG CGGCATGGGT
GGTATGGGCG GCATGGGCGG CATGGGCATG TAA
 
Protein sequence
MAAKEVKFGD SARARMVEGI NILADAVKVT LGPKGRNVVL ERSFGGPTVT KDGVSVAKEI 
ELKDKFANMG AQMVKEVASK TSDIAGDGTT TATVLAQSIV REGMKFVAAG MNPMDLKRGI
DKAVVATIAE LQAFSKPCTT TKEIAQVGSI SANSDSDIGE IIANAMEKVG KEGVITVEDG
KSLANELDVV EGMQFDRGYL SPYFINNGDK QQALLENPFV LLFDKKISNI RDLLPILEQV
AKAGRPLLII AEDVDGEALA TLVVNNIRGI LKTVAVKAPG FGDRRKAMLE DIAILTGGTV
IAEETGLTLE KAVLKDLGQA KRIEVAKENT TIIDGAGEAA AIEARVKQIR IQIEEATSDY
DKEKLQERVA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG IVAGGGVALI
RARAAVGKLK GDNHDQDAGI KIVLRAMEQP LREIVANAGD EPSVVVDKVQ RGKGNYGYNA
STGEYGDMVE MGVLDPTKVT RTALQNAASV AGLMLTTECM VAELAEDKPA GGMPDMGGMG
GMGGMGGMGM