| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0420 |
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| Symbol | |
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| ID | 3568873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 460751 |
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| End bp | 463114 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637678860 |
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| Product | PAS |
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| Protein accession | YP_283647 |
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| Protein GI | 71906060 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0516903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGTG ATTTCTTCTC GCTGGCCGGC TTTGGCGAAG CGGCGAGCAA ACTGCCTATC
GAGCGGCGCA TCCACCTGAT TCGTATCGAA ACCTTTTTTG GTCATGCGCC AGGGAATGCG
ATCAGGATCG CGCTGGTTTC GCTGATCTTC ACGACGGCGC TCGAAAAATC AGGGGCGGGG
CAAAACACCA TTTTTGCCTG GATCGGCGTG ACCCTGCTGA CCTGCCTGGC AATGATTGGC
TACGAAGCAT GGGTCCGGCA TGTCGGACTC AGCATCGACA ACGCCGAGTC TCACCTCCGC
CGGCGCCGAC TGCTCGGACT CTTTGCCGCA GTATCGGTAG CGACCGGTAC GGTGTTGGTA
CCGGTTGACG CTGATCCTCT GTACCACGCG CTGGCGGTCT TCCTGGCATA CGGCATGGTG
TCTGTCACGG CACTGGCTTA TGCCGTGCTG CAGCGCTTCT ATACTGAAAT CGCGCTGATT
GCCTCCGGTC CCGTGCTGGT TCGCTACGTT TGGCTCTGGC ATGAAAAAGG GGACAGCTTT
TTTGGTTTTC TGGCGATCGT GATCGTCTTT ACGACTGCCC TCATCCTCTT TCGCGGTGCG
GCCAATACAC GGTGGACCAC CCAGGCCATC GAAGGCTATC TGCAGTTGCA CGACGAAATC
GTCGAGCGCT GCCGGATCGA AGCCGCGCTG GCGGCAGCCG AGGAAAACGC CTCGCGGCTG
GCCGCCATGC TGCGCCTGAT GTGCGACAAC GTACCCGACA TGATCTGGGC CAAGGATCTG
GAAGGACGCT ACCTCTTCGC CAATCAGGCG ATGGCCAGTT GCTTGCTGTG TGCCAGCGAC
ACCGGCGAGC CGGTGGGCAA GACCGATTTG TTCTTTGCCG AGCGGGAGCG CGCCGCGCAT
CCGGAGGACA GCCAATGGTT CACTTTCGGC GAGCAATGTC TGGCGACGGA CCTCGAAACC
CTGCGCCGGG GCGTACCGAG CGCTTTCGAA GAAATGGGCA ATGTGCGGGG GCGTTATCTG
TGCATTGATG CCTTCAAGGC CCCCTTCGTC GATGGTTCGG GGCAGGTGAT CGGCACTGTC
GGCAGCGCCC GGGATATCAC CGAGCGCAAG CAGGTCGAGC GGGAGCTCGC CAAGTATCGG
GAAAACCTCG AAGGTGTGGT CCGCGAGCGA ACCCGCGAGC TGACCGTGGC CAAGGATCTG
GCGGAAACGG CCAACCGTGC CAAGTCAGCC TTCCTGGCCA ACATGAGCCA CGAGATTCGG
ACGCCGCTCA ATGCCATTAC CGGCATGGCC TATCTGATGC GGCGCGACGG TGTCAGCGAA
AAGCAGGGCG AACGACTGGA CCGGATCGAT GCGGCCGGTC AGCATCTGCT CGAAATCATT
CATGACGTAC TCAGCCTGTC GCAAATCGAG GCTGGCCGCA TGACGCTTGA AGCCAAGCCG
CTCGACCTGT CTGTCGTGTG TACCGGTGCA CTCGAAGTCC TGGCTGACGA GGCGCGGCGC
AAGGGGCTAT CCCTGCGCCA AGAGTTTGGC GAATTGCCGG TCGGCCTGCA CGGTGACGCC
GTGCGTTTGC GCCAGTCGCT ACTCAACTAT CTGGGCAATG CCGTCAAATT CACCGAGGCC
GGCAGCGTCG TCCTGCGTTG CCATGAACTA TCGCGCAACG ATAGCGGCCA TCTGATCCGC
TTCGAAGTCG TCGATAGCGG GCCGGGAATG TCGCCTGAGT CTCGGACACA ACTATTCCAG
CCCTTCCACC AGGTCGACAG CTCGTCGACC CGCGTCCATG GCGGGACCGG GCTCGGGCTG
GTCATCACGC GGCGACTGGC CCAGCTGATG GGTGGCGATG CCGGCTGCGA CAGTACGCCG
GGCGTCGGGA GTCGCTTCTG GTTTACTGTC TGCCTGGCCG ATGGCGAGCC TGCGCCGAAC
GCCAGCGAAG GTGCTGTCGT CAATGCCGCC AATGAACTGT TGCGTCATCG CTTTGCCGGG
CGCAGCGTCC TGCTCGCCGA GGACAGTTGG GTCAATCGCG AGGTCGTCGT CGAAATGCTC
GAAGACCAGT TGCTTGTCGT CGATGTCGTT GAAAACGGCG TGGCAGCGGT TGAGCGGGTC
CGCGAACGGG ATTACGACCT GGTGCTGATG GATGTCCAGA TGCCCGAAAT GGATGGTCTG
GAGGCGACCC GCCGTATTCG GGCCATGCCG CAGCGGGAGC GGCTGCCGAT CATCGCCCTG
ACGGCCAACG CCTTCGCCGA GGATCGCCAG GCCTGTCTGG AGGCCGGGAT GAACGACTAC
CTGGCCAAGC CGTTCAGTCC GGACAAACTG TTTGCCAGGG TATTGCATTG GTTGCTCGAA
GCCGAGCGGC AGGCCGGGCA TTAG
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| Protein sequence | MKRDFFSLAG FGEAASKLPI ERRIHLIRIE TFFGHAPGNA IRIALVSLIF TTALEKSGAG
QNTIFAWIGV TLLTCLAMIG YEAWVRHVGL SIDNAESHLR RRRLLGLFAA VSVATGTVLV
PVDADPLYHA LAVFLAYGMV SVTALAYAVL QRFYTEIALI ASGPVLVRYV WLWHEKGDSF
FGFLAIVIVF TTALILFRGA ANTRWTTQAI EGYLQLHDEI VERCRIEAAL AAAEENASRL
AAMLRLMCDN VPDMIWAKDL EGRYLFANQA MASCLLCASD TGEPVGKTDL FFAERERAAH
PEDSQWFTFG EQCLATDLET LRRGVPSAFE EMGNVRGRYL CIDAFKAPFV DGSGQVIGTV
GSARDITERK QVERELAKYR ENLEGVVRER TRELTVAKDL AETANRAKSA FLANMSHEIR
TPLNAITGMA YLMRRDGVSE KQGERLDRID AAGQHLLEII HDVLSLSQIE AGRMTLEAKP
LDLSVVCTGA LEVLADEARR KGLSLRQEFG ELPVGLHGDA VRLRQSLLNY LGNAVKFTEA
GSVVLRCHEL SRNDSGHLIR FEVVDSGPGM SPESRTQLFQ PFHQVDSSST RVHGGTGLGL
VITRRLAQLM GGDAGCDSTP GVGSRFWFTV CLADGEPAPN ASEGAVVNAA NELLRHRFAG
RSVLLAEDSW VNREVVVEML EDQLLVVDVV ENGVAAVERV RERDYDLVLM DVQMPEMDGL
EATRRIRAMP QRERLPIIAL TANAFAEDRQ ACLEAGMNDY LAKPFSPDKL FARVLHWLLE
AERQAGH
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