Gene Daro_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0413 
Symbol 
ID3568866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp455110 
End bp456000 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content60% 
IMG OID637678853 
Product4-hydroxybenzoate octaprenyltransferase 
Protein accessionYP_283640 
Protein GI71906053 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.320308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGC CCGCGCTCAA AGAAAGAATC AACCTCTACG AAAAACTGAT GCGGCTCGAC 
AAGCCGATCG GCATCCTGCT GCTGCTCTGG CCGACGCTGT GGGCGCTGTG GCTCTCGGCG
CTCGGCCGGC CGAACTGGAT CGTGGTCTGG ATATTCATCC TCGGCACGGT GCTGATGCGT
TCAGCCGGCT GCGTGATCAA TGACTACGCC GACCGCGATT TCGACAAGCA CGTCGAGCGC
ACGAAAGAGC GCCCGCTCAC CGCCGGCAAG GTGACCACCA AGGAGGCGCT GGCGCTGTTT
GCCGGGCTGT CTCTGCTTTC ATTTTTGCTG GTTGTATTTC TCGGCAATAC GCTGGTCATC
TGGCTTTCGC TGCCAGCCGT CTTCCTGGCG GCGAGCTATC CCTTCACCAA GCGCTTTTTC
GCCATTCCCC AGGCCTATCT CGGTGTTGCC TTCGGTTTCG GCATCCCGAT GGCCTATGCG
GCGCATCTCG GCGAAGTGCC CGCCGAAGCA TGGTGGCTGC TGCTCGCCAA TGTATTCTGG
GCGGTGGCCT ACGACACCGA ATACGCCATG GTCGACCGCG ACGATGACCT GAAAATCGGG
ATCAAGACCT CGGCCATCAC CTTCGGCCGT TTCGATGTGG CGGCTGTGAT GCTGTGCTAT
GGCGTGACCC TCGCCATCAT CGGCGGGATT GGCTACTCGC TGAACCGAGG CCCGGCTTTT
TACGCCGGAC TGGCCGTGGC GACCTGCATC ATGGGCGTGC ACTACACTTG GATTCGCGGC
CGGGAACGGA TGCCGTGCTT CAAGGCTTTT CTGCACAACA ACTGGGTTGG GTTGAGTATT
TTTGTCGGCA TCGTCGTCGA TTTTCTGGTT TCAGGGAGGA ACTTGTGGTG A
 
Protein sequence
MNWPALKERI NLYEKLMRLD KPIGILLLLW PTLWALWLSA LGRPNWIVVW IFILGTVLMR 
SAGCVINDYA DRDFDKHVER TKERPLTAGK VTTKEALALF AGLSLLSFLL VVFLGNTLVI
WLSLPAVFLA ASYPFTKRFF AIPQAYLGVA FGFGIPMAYA AHLGEVPAEA WWLLLANVFW
AVAYDTEYAM VDRDDDLKIG IKTSAITFGR FDVAAVMLCY GVTLAIIGGI GYSLNRGPAF
YAGLAVATCI MGVHYTWIRG RERMPCFKAF LHNNWVGLSI FVGIVVDFLV SGRNLW