Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0391 |
Symbol | |
ID | 3569862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 427796 |
End bp | 431080 |
Gene Length | 3285 bp |
Protein Length | 1094 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637678833 |
Product | Rhs element Vgr protein |
Protein accession | YP_283620 |
Protein GI | 71906033 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.437245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCCGA CTTTCCTCTC AGACACTCGT CTCTACGAAC TCACCTGGCG CGATGAAGCG GGGCCTGATC TGGCGGTCGA AGCCTGGTGG GGGCGGGAGG CCTTGTCCGG TGGATTTGAA ATCTGCATTG ACCTGCTGGC AACCGATACC CATCTCGAAC TCAAACGTTT CCTCGGCCGT TCCCTGACCC TGAACACCCG TCTCTCCGAC GGCAGCCGGG CCAGCCGTAG CGGCCTCGTC CGCGCTGCCC AGAAGCTCGG TGCCGACGGC GGGTTCGCCC GCTACCGCCT GACCGTTGTG CCCTGGATCT GGCTACTCAG CCGCGGCCGG CACAACCGTG TCTTTCAGGA AAAGACCGTC ATCGATATTG TCGAAACCGT CTTTGCCGAC TACGCCGACG TCGCCGCCTG GCAATGGAGC GACGAAGTCG CCGGCTTCCT GGCCGATGCT CGGCCGCGCA GCTACTGCGT GCAATACGGC GAATCCGACT ACGCCTTCGT CTCCCGCCTG CTGGCCGAAG AAGGCCTTGG CTGGTGCGTC GAAGAAGACA AGGAAGCCCC GGCCGGCCAT CGCCTGCGCC TTTTTGCCGA CAGCCAGCGC TTTCCCGAAG ACATCGTTTC CCAATCGGCC AATGGCGGCC AGGGCATCCG CTACCACCGG GCCGATTCGC AAGAGGATCA GGACGCCATC CTCGCCTTCG GTGAACGCCA CCGCCTGGCC AGCTCGGTGA TCAGCGCCAT CACCTACGAC TACAAAGCCA AGAAGAACGT CACCCTCAAC ATCACCAGCG CCCAGCCCAT CGGCGGCAAG AACGCCCCGG TCCTCGAAAG CCACGACCAC CCCGGCCTCT ACGCCTGGGC CAATGCAGCC GAAGCCGAAC GCTATGGCCG GCTGGCCATG GAAGCCCGCG AGGCCGGGCA TCGCACCTGG CTGGGTCGCA GCACCGTGCG CAGCCTGCGT CCCGGCACCG TCTTTGACCT GATCGGCCTG CCCATCGATC CCGCCAAGGC CGACGCCGAA CACCGGTACG CCGCCACCGA CATCACCCAC CTCGGCATCA ATAACCTGAG CGGCGAAGCC ATCGCCACCA TCGCCCAACG CCTCGGGCAA GGCGCCCAGA AGATCGACGC CAGCGATGCT CTGGCGACCG GTGATGCCCT GACCCCGATC AGTGCTCCGC CCAGCCTCCC GACTGAACTC CTCAAGCTCG CCGTCGAGCG CGGCTACGGC AACACCTTCG ACGCTCACGC CGCCAACGTC CCGTGGCGCC CCGAACTCGA AGACCGTTCC GGTGCCCGGA TCAATCCCCG GCCCACCGCA CCCGGCCCGA TGAGCGCCCT CGTCGTTGGT CCCGAAGGCC AAACCAGCCC TAGCGGCCCC GACGAACTCT GGTGCGATGC CCTCGGCCGC GTCAAGATCC GCTTCCACTG GCAACAAGCT GAAACCCCGG ATGATCGTGA CTCCTGCTGG GTCCGCGTCC TCAGCCGGCA AGCCGGCCCC GGCATGGGCT GGCAATGGCT CCCCCGCATC GGCCAGGAAG TCCTCGTCGA CTTCGTCGGC GGCGACATCG ACCGCCCCTA CCTGCTCGGC GCCCTCTACA ACGGCCAGGG GGAGGGCGGC ATCAGCGCCA CCCCGGGTGG CGACAGCACC AAAACCCAGG CTGACAACGT CTTCGATAGC GCCAGCGACC ACCGCCCGAG CGGCCAGGGC AACACCGCCG GCGGCAACAG CCCCGCCTGG CACGGCGCCG CCGAAACCAG CCACCGCCAC AGCGCCGCCC TCACCGGCTT CAAGAGCAAG GAATTCGGCA GCGCCAGCGG CTACAACCAA CTGCTCCTCG ACGACAGCGA CCAACAACAA CGCCTGCAAC TCAAGAGCAC CCAACACCAC AGCGAACTCA ACCTCGGCCA CCTCATCCAC CAGGCCGACA ACTACCGTGG CTCCTTCCGC GGCACCGGCA CGGAGTTGCG CACGGACGCC TGGGGCGCCC TGCGTGGCGG CCAAGGCCTG GTCATGACCA CCTGGGCTCA CCCGTCCGCC GGTGCATCGA CGGCACAACC GGCCGGCGAC ATGGCCCCGG CCATGGCCCT GCTCAGGCAA GCTGATACCC TCGCCAGAAC CCTTAACCAG GCCGCCGCCA CCCACCAGAC CGTCCAACTC TCAAGCGCCA TCGGCACCCA GGGCCAGGAC CAAAGCAAGA TTGACCCCGA AGCCGCACCG CTCAAAGCGC TGCACAAAGT CAGTAGCGGT ATGGTCGACG CCAAGGATCA AAGCGCCGCC AAGCAAGACG CCCAACAAAA AATCACCAAC GCCAGCCCCG ACAAACGCCC GCACCTCACC GACCCCGCCA TCGTCCAGAC CGGCAAAGCC GGCATCGGCC ACGTCGCTGG GCAGAACCTG CAATACACCA ACGGCGAAAC CCTCGTCCTC GCCAGCGGCG AAGACACCAA CCTCGCCATC GCCGGCAAAG CCAGAATCCA CAGTGGCCAG GCCATCGGCC TCCTGGCCGG CGCCATCGCC CCGGGCGACG GCAACACCGG TATCAAGCTG ATCGCCGCCA AGGACGACAT CGACCTGCAG GCCCAAAGCG ACGAAATGAA GTTCCTGGCC AAGAAAGACA TCAAACTCGT CTCCGCCACC CAGCACATCG ACTTCGCGGC AGCCAAGAAG ATCCACCTCG CCGTACAAGG CGGGGCGAGC ATCACCATCG ATGGTGGCAT CACCGTGCAG TGTCCTGGGA CGATTACGGT GCATGCGAGC AAGAAGAGTT TTACGGGGCC GGGACAAGGA AGTTACGCAC TACCTCAATT TCCGCAGACC GCTTTGCCAG AAACGGTTGC CGCATTCTCG ATGCTTTTAA CGCACATACC TGGCCCTAGT GGCAAACCGC TTAGCGATTT GGATTGGCAA ATTGTGCGTG CGTCTGACGA AGACGGTGCG CGCATGGCGG ATAAATCACT ACTCAAAGGA GTAAGTAACG GTGAAGGACG CCTTGCGCTT AGCCAGTCCG AGCAAGACCT CCTGAAAGAC GAATATGACG ATAGCCCAAA CAATATTTGG GTTCGATTTG GTGGGCAAGT ACGGAAACTC TGCATTACTC AAGAGAAGGA AGATTGGACT GATACGCAAA AAATGGAATA TGCGCTGGAC GCGCTTGGCT ATACCGACAT GATTTCCAAC GTAGATGGCA GTACGCCGAC AGAAACAGGG CACGCCAAGT GGGCAAGGCT TTGCGCCGGT TCAATGGCAA CGGAAGCCGT ATTCAATCTG ATCAAAAAAG GCTAA
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Protein sequence | MLPTFLSDTR LYELTWRDEA GPDLAVEAWW GREALSGGFE ICIDLLATDT HLELKRFLGR SLTLNTRLSD GSRASRSGLV RAAQKLGADG GFARYRLTVV PWIWLLSRGR HNRVFQEKTV IDIVETVFAD YADVAAWQWS DEVAGFLADA RPRSYCVQYG ESDYAFVSRL LAEEGLGWCV EEDKEAPAGH RLRLFADSQR FPEDIVSQSA NGGQGIRYHR ADSQEDQDAI LAFGERHRLA SSVISAITYD YKAKKNVTLN ITSAQPIGGK NAPVLESHDH PGLYAWANAA EAERYGRLAM EAREAGHRTW LGRSTVRSLR PGTVFDLIGL PIDPAKADAE HRYAATDITH LGINNLSGEA IATIAQRLGQ GAQKIDASDA LATGDALTPI SAPPSLPTEL LKLAVERGYG NTFDAHAANV PWRPELEDRS GARINPRPTA PGPMSALVVG PEGQTSPSGP DELWCDALGR VKIRFHWQQA ETPDDRDSCW VRVLSRQAGP GMGWQWLPRI GQEVLVDFVG GDIDRPYLLG ALYNGQGEGG ISATPGGDST KTQADNVFDS ASDHRPSGQG NTAGGNSPAW HGAAETSHRH SAALTGFKSK EFGSASGYNQ LLLDDSDQQQ RLQLKSTQHH SELNLGHLIH QADNYRGSFR GTGTELRTDA WGALRGGQGL VMTTWAHPSA GASTAQPAGD MAPAMALLRQ ADTLARTLNQ AAATHQTVQL SSAIGTQGQD QSKIDPEAAP LKALHKVSSG MVDAKDQSAA KQDAQQKITN ASPDKRPHLT DPAIVQTGKA GIGHVAGQNL QYTNGETLVL ASGEDTNLAI AGKARIHSGQ AIGLLAGAIA PGDGNTGIKL IAAKDDIDLQ AQSDEMKFLA KKDIKLVSAT QHIDFAAAKK IHLAVQGGAS ITIDGGITVQ CPGTITVHAS KKSFTGPGQG SYALPQFPQT ALPETVAAFS MLLTHIPGPS GKPLSDLDWQ IVRASDEDGA RMADKSLLKG VSNGEGRLAL SQSEQDLLKD EYDDSPNNIW VRFGGQVRKL CITQEKEDWT DTQKMEYALD ALGYTDMISN VDGSTPTETG HAKWARLCAG SMATEAVFNL IKKG
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