Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0386 |
Symbol | |
ID | 3569857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 417912 |
End bp | 418970 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637678828 |
Product | phenylacetic acid degradation operon negative regulatory protein PaaX |
Protein accession | YP_283615 |
Protein GI | 71906028 |
COG category | [K] Transcription |
COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0000000187716 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0170462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAACA CTGGCATACA AAACGATACT CGGCATCAGG TACAATCGAA GTCTTCAACG GGTCGCCATC GGTCCGAGCC ATTTCCTCAA CGCCCTTCGC CAGCCTATCT CGTGAGCACC GCCATCCAAT CCCGCCTGAA TGAATTCCGG CAACAGCGCC GTGTCCAGGC TGGCTCGCTG ATCATCACCG TCTTTGGCGA CGCGATCCTG CCGCGCGGCG GACGCATCTG GCTAGGCAGC CTGATCCGCC TGCTCGAACC ACTCGAACTC AACGAACGGC TGATCCGCAC CTCCGTCTTC CGTCTGGTCA AGGAGGAATG GCTGCGCACC GAAACCATCG GCCGGCGTGC CGACTACGTG CTGACGCCAT CGGGCCGTCG GCGTTTCGAG GAAGCTTCAC GCCACATCTA CGCCTCGGAT GCGCCACTCT GGGATCGCCG CTGGCGCCTG ATCCTGGTCG TCGGCGATCT GGACCCCAAG CTGCGTGAGC AGGTCCGGCG CGCCTTGTTC TGGCAGGGGT TCGGCGCCTT GGGGGCCGAT TGCTTCGTGC ACCCTAGCGC CGAGTTGTCC AGCGTGCTCG ACACGCTGAT TACCGAAGGC CTGTCATCGG CCATCGGCGC GCTGATGCCC TTGTTCGCGG CCGATTCGCG TTCGGCCCAG TCGGCCAGCG ACGCCGACCT CGTGCACCGC GCCTGGGATC TCGGGCATCT GGCCGAGGCC TACAGCGCCT TCGTCGCCAC CTATCAGCCC ATTCTCGACG AACTCCGGCG CGACCATCTG GCCGGGGTCA GCGAGCAGGA TGCCTTCCTG CTGCGCATCC TGCTCATCCA CGATTACCGG CGCCTGCTGC TGCGCGATCC GGAATTGCCG GAAGTCCTGC TGCCGGCCAA CTGGCCAGGT CAGCAGTCGC GACTGTTGTG CAAGGAACTG TACAAGCGGC TGGAACCCCT CGCCAGCCGC CACCTCGACC AGCAGTTGTG CCTGGCCGAT GGACGCGTGC CGGAAGAGGA CCTGTCGCTC CCCGAGCGCT TCCCGCAGAA CGATCCGCTA TCGGCCTGA
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Protein sequence | MLNTGIQNDT RHQVQSKSST GRHRSEPFPQ RPSPAYLVST AIQSRLNEFR QQRRVQAGSL IITVFGDAIL PRGGRIWLGS LIRLLEPLEL NERLIRTSVF RLVKEEWLRT ETIGRRADYV LTPSGRRRFE EASRHIYASD APLWDRRWRL ILVVGDLDPK LREQVRRALF WQGFGALGAD CFVHPSAELS SVLDTLITEG LSSAIGALMP LFAADSRSAQ SASDADLVHR AWDLGHLAEA YSAFVATYQP ILDELRRDHL AGVSEQDAFL LRILLIHDYR RLLLRDPELP EVLLPANWPG QQSRLLCKEL YKRLEPLASR HLDQQLCLAD GRVPEEDLSL PERFPQNDPL SA
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