Gene Daro_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0386 
Symbol 
ID3569857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp417912 
End bp418970 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content65% 
IMG OID637678828 
Productphenylacetic acid degradation operon negative regulatory protein PaaX 
Protein accessionYP_283615 
Protein GI71906028 
COG category[K] Transcription 
COG ID[COG3327] Phenylacetic acid-responsive transcriptional repressor 
TIGRFAM ID[TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0000000187716 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0170462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACA CTGGCATACA AAACGATACT CGGCATCAGG TACAATCGAA GTCTTCAACG 
GGTCGCCATC GGTCCGAGCC ATTTCCTCAA CGCCCTTCGC CAGCCTATCT CGTGAGCACC
GCCATCCAAT CCCGCCTGAA TGAATTCCGG CAACAGCGCC GTGTCCAGGC TGGCTCGCTG
ATCATCACCG TCTTTGGCGA CGCGATCCTG CCGCGCGGCG GACGCATCTG GCTAGGCAGC
CTGATCCGCC TGCTCGAACC ACTCGAACTC AACGAACGGC TGATCCGCAC CTCCGTCTTC
CGTCTGGTCA AGGAGGAATG GCTGCGCACC GAAACCATCG GCCGGCGTGC CGACTACGTG
CTGACGCCAT CGGGCCGTCG GCGTTTCGAG GAAGCTTCAC GCCACATCTA CGCCTCGGAT
GCGCCACTCT GGGATCGCCG CTGGCGCCTG ATCCTGGTCG TCGGCGATCT GGACCCCAAG
CTGCGTGAGC AGGTCCGGCG CGCCTTGTTC TGGCAGGGGT TCGGCGCCTT GGGGGCCGAT
TGCTTCGTGC ACCCTAGCGC CGAGTTGTCC AGCGTGCTCG ACACGCTGAT TACCGAAGGC
CTGTCATCGG CCATCGGCGC GCTGATGCCC TTGTTCGCGG CCGATTCGCG TTCGGCCCAG
TCGGCCAGCG ACGCCGACCT CGTGCACCGC GCCTGGGATC TCGGGCATCT GGCCGAGGCC
TACAGCGCCT TCGTCGCCAC CTATCAGCCC ATTCTCGACG AACTCCGGCG CGACCATCTG
GCCGGGGTCA GCGAGCAGGA TGCCTTCCTG CTGCGCATCC TGCTCATCCA CGATTACCGG
CGCCTGCTGC TGCGCGATCC GGAATTGCCG GAAGTCCTGC TGCCGGCCAA CTGGCCAGGT
CAGCAGTCGC GACTGTTGTG CAAGGAACTG TACAAGCGGC TGGAACCCCT CGCCAGCCGC
CACCTCGACC AGCAGTTGTG CCTGGCCGAT GGACGCGTGC CGGAAGAGGA CCTGTCGCTC
CCCGAGCGCT TCCCGCAGAA CGATCCGCTA TCGGCCTGA
 
Protein sequence
MLNTGIQNDT RHQVQSKSST GRHRSEPFPQ RPSPAYLVST AIQSRLNEFR QQRRVQAGSL 
IITVFGDAIL PRGGRIWLGS LIRLLEPLEL NERLIRTSVF RLVKEEWLRT ETIGRRADYV
LTPSGRRRFE EASRHIYASD APLWDRRWRL ILVVGDLDPK LREQVRRALF WQGFGALGAD
CFVHPSAELS SVLDTLITEG LSSAIGALMP LFAADSRSAQ SASDADLVHR AWDLGHLAEA
YSAFVATYQP ILDELRRDHL AGVSEQDAFL LRILLIHDYR RLLLRDPELP EVLLPANWPG
QQSRLLCKEL YKRLEPLASR HLDQQLCLAD GRVPEEDLSL PERFPQNDPL SA