Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0358 |
Symbol | |
ID | 3569831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 390481 |
End bp | 391683 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637678800 |
Product | hypothetical protein |
Protein accession | YP_283587 |
Protein GI | 71906000 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 0.23836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000671481 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGAACTCAC AGAGAGAACG CCTCAAGGTG CTGAGCGCCG GGATATTCAG CCTGCTGCTG ACCTTTGGCG TGGCCCGCTT TGCCTACACG CCCTTGCTGC CGATCATGCA GCAGCAGGCC GGGCTGGGGC TGGCCGAAGC CGGCTGGCTG GCGGCGCTCA ACTACGCCGG TTATCTCAGT GGCGCACTGA TTGCCTCGCT GATCAGCAAC CTGGTGCTCA AGGACAAGCT GTACCGGATC GGCCTGGTGG TCGCCATCCT GAGCACGGTG ATGATGGGGC TGACCACCGA CCCGCTGCTC TGGATGGCCT CGCGCTTCAT CGCCGGCCTC TCCAGCGCGG CCGGCATGCT GCTCGGCACC GGGCTGATCC TCAACTGGCT GATTCGCCAC AACCACCGGC CGGAGTTGGG CATCCACTTT GCCGGCATCG GGCTGGGCAT TTCCGGTTGT GCCGTGGCGG TGTGGCTGAT GGGCGGCTGG CTGGACTGGC GCGAGCAGTG GTTCGCCTTT TCGGCCATTG CTTGTCTGCT CATTGTGCCG GCCATGGCCT GGTTGCCGGC GCCCGATACC AGTCCGGTGA CGAAGAGCGG CGTCACCATG CACGACAATC CGCCGAGCCC GCTGTTCCTG CGCATCTTCA TGGCAGCCTA CTTCTGTGCC GGTTTCGGCT ATGTGATCAG TGCCACCTTC ATCGTCGCCA TCGTCAATGG CCTGCCTGGT CTGGCCGGGC AAGGCGGGCT GGCCTTCCTG GCCATCGGTC TGGCCGCTGC GCCCGCCGCC TTCAACTGGG ATCTGATCGC CCGCTACACG GGGGACATCA ATGCCCTGAT ACTCGCCGCC GTGCTGCAGA TATTCGGCAT TGTCCTGCCG GTGGCGGTCG GTGGGCTGAT TCCGACGATC TTTGGTGCGT TGTTGTTCGG TGGAACCTTC ATCGGCATGG TGAGTCTGGT CTTGACCATG GCCGGGCGCT ACTACCCGAC CAAGCCGGCC AAGATGATGG GCAAGATGAC GCTCTCCTAC GGCGTGGCGC AGATCATCGG GCCGGCCATC GTTGGCTGGC TGGCCACCCG GCTCGGTAAC TATTCGATTG GCCTGTATAT CGCGGCCGGC GTGATGGTGA TGGGCGTCGT GCTGTTGGTT ATACTGAAAC TGGTGGAAAA GCGGGACGCC ACGCTGGCGC TTGAGCCCAG CTTGCAGAAC TGA
|
Protein sequence | MNSQRERLKV LSAGIFSLLL TFGVARFAYT PLLPIMQQQA GLGLAEAGWL AALNYAGYLS GALIASLISN LVLKDKLYRI GLVVAILSTV MMGLTTDPLL WMASRFIAGL SSAAGMLLGT GLILNWLIRH NHRPELGIHF AGIGLGISGC AVAVWLMGGW LDWREQWFAF SAIACLLIVP AMAWLPAPDT SPVTKSGVTM HDNPPSPLFL RIFMAAYFCA GFGYVISATF IVAIVNGLPG LAGQGGLAFL AIGLAAAPAA FNWDLIARYT GDINALILAA VLQIFGIVLP VAVGGLIPTI FGALLFGGTF IGMVSLVLTM AGRYYPTKPA KMMGKMTLSY GVAQIIGPAI VGWLATRLGN YSIGLYIAAG VMVMGVVLLV ILKLVEKRDA TLALEPSLQN
|
| |