| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0345 |
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| Symbol | |
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| ID | 3569818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 378127 |
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| End bp | 379101 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637678787 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_283574 |
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| Protein GI | 71905987 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000651019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCAAAGCA GTGGACTTCT CAAACCCCGC ATTATCGACG TGCAGAGCGT GTCGCCTGTG
CAAGCCAAGG TGGTCATGGA GCCGTTCGAA CGCGGCTATG GCCATACCCT CGGCAACGCA
CTGCGCCGCA TTCTGCTCTC CTCGATGGTC GGTTATGCAC CGACCGAAGT CGGCATCGAC
GGCGTGCTCC ACGAGTACTC CACCGTTGAT GGCGTGCAGG AAGATGTCGT TGATATCCTT
CTCAATCTGA AGGGTGTCGT CTTCAAATTG CACAACCGTG ACGTGGTTAA CCTCAAGCTG
GTCAAGGAAG GCGAAGGCGC CGTCCGTGCT GGCGATATCG AGTTGCCCCA CGACGTCGAG
ATCATCAATC CGGAACATGT GATCGCTCAC CTCTCTCCTG GTGGCAAGCT TGCCATGGAG
ATCAAGGTCG AGAAGGGTCG CGGCTACGTG CCGGGTAACG TCCGTAACCT GGGCGATGCC
AAGACCATCG GCAAGCTGGT TCTGGACGCT TCGTTCAGCC CGATCCGTCG CGTTGCTTAC
GCGGTCGAAA GTGCCCGCGT TGAACAGCGT ACCGATCTGG ACAAGCTGAT TGTTGATATC
GAAACCAATG GTGTTGTCGA GCCGGAAGAA GCCATTCGCT ACGCTGCTCG CGTGCTGATG
GAACAACTTT CCGTGTTTGC CGACCTGGAG GGTACCGCTC CTGTGGCCGA GGCTTCCAAG
CCGGCTCAGG TTGATCCGGT TCTGCTCCGC CCGGTTGATG ACCTCGAGCT GACGGTTCGT
TCCGCGAACT GCCTGAAGGC CGAGAATATC TACTACATCG GCGATCTGAT CCAGCGTACC
GAGAATGAAC TTCTCAAGAC CCCGAATCTG GGTCGTAAGT CACTGAATGA GATCAAGGAA
GTTTTGGCCG CACGCGGTTT GACGCTCGGC ATGAAACTGG AAAATTGGCC GCCCGCCGGT
CTGGAAAAGG CGTAA
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| Protein sequence | MQSSGLLKPR IIDVQSVSPV QAKVVMEPFE RGYGHTLGNA LRRILLSSMV GYAPTEVGID
GVLHEYSTVD GVQEDVVDIL LNLKGVVFKL HNRDVVNLKL VKEGEGAVRA GDIELPHDVE
IINPEHVIAH LSPGGKLAME IKVEKGRGYV PGNVRNLGDA KTIGKLVLDA SFSPIRRVAY
AVESARVEQR TDLDKLIVDI ETNGVVEPEE AIRYAARVLM EQLSVFADLE GTAPVAEASK
PAQVDPVLLR PVDDLELTVR SANCLKAENI YYIGDLIQRT ENELLKTPNL GRKSLNEIKE
VLAARGLTLG MKLENWPPAG LEKA
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