Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0344 |
Symbol | rpsD |
ID | 3567090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 377474 |
End bp | 378103 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637678786 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_283573 |
Protein GI | 71905986 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 0.423009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000464518 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGGCTCGTA ATCTCGATCC GAAATGCCGT CAGTGCCGCC GCGAAGGCGA AAAGCTGTTC CTGAAGGGCG AAAAGTGTTT TACCGACAAG TGTGCCATTG AGCGTCGTTC TTACGCGCCG GGCCAGCACG GTCAAAAGTC AGGTGCCCGT TTGTCCGACT ACGGCGTTCA CCTGCGTGCC AAACAGAAGA TCCGCCGCGT TTACGGCGTT CTTGAAGGCC AGTTCCGCAA AACCTTTGCC GAAGCTGATC GCCGCAAGGG CCAGACCGGT GAAAACCTCC TGCAGTTGCT CGAAGCTCGC CTGGATTCCG TTGCCTACCG CATGGGTTTC GGTGCTTCCC GCTCCGAGTC GCGCCAGGTT GTTCGTCATA ACGGCATTCT GGTTAACGGC AAGCGCGTTA ACATTCCGTC GTTCATCGTC AAGCCGGGTG ATGTTGTCCA GCTGACCGAT CGCGCACGTG CTTCCCTGCG TTGCAAGGCC GCTCTCGAAG CTGCCGAGTC CCGCGGTTTC CCGGAGTGGA TCTCCGTGGA CGTCAAGGAA GGCAAGGGCA CGTTCAAGGC CATGCCGCAG CGCTCCGAAT TGCCGGCGAC CCTGAACGAA GGTCTCGTCA TCGAACTTTA CTCGAAGTAA
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Protein sequence | MARNLDPKCR QCRREGEKLF LKGEKCFTDK CAIERRSYAP GQHGQKSGAR LSDYGVHLRA KQKIRRVYGV LEGQFRKTFA EADRRKGQTG ENLLQLLEAR LDSVAYRMGF GASRSESRQV VRHNGILVNG KRVNIPSFIV KPGDVVQLTD RARASLRCKA ALEAAESRGF PEWISVDVKE GKGTFKAMPQ RSELPATLNE GLVIELYSK
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