Gene Daro_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0344 
SymbolrpsD 
ID3567090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp377474 
End bp378103 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content59% 
IMG OID637678786 
Product30S ribosomal protein S4 
Protein accessionYP_283573 
Protein GI71905986 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value0.423009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000464518 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGCTCGTA ATCTCGATCC GAAATGCCGT CAGTGCCGCC GCGAAGGCGA AAAGCTGTTC 
CTGAAGGGCG AAAAGTGTTT TACCGACAAG TGTGCCATTG AGCGTCGTTC TTACGCGCCG
GGCCAGCACG GTCAAAAGTC AGGTGCCCGT TTGTCCGACT ACGGCGTTCA CCTGCGTGCC
AAACAGAAGA TCCGCCGCGT TTACGGCGTT CTTGAAGGCC AGTTCCGCAA AACCTTTGCC
GAAGCTGATC GCCGCAAGGG CCAGACCGGT GAAAACCTCC TGCAGTTGCT CGAAGCTCGC
CTGGATTCCG TTGCCTACCG CATGGGTTTC GGTGCTTCCC GCTCCGAGTC GCGCCAGGTT
GTTCGTCATA ACGGCATTCT GGTTAACGGC AAGCGCGTTA ACATTCCGTC GTTCATCGTC
AAGCCGGGTG ATGTTGTCCA GCTGACCGAT CGCGCACGTG CTTCCCTGCG TTGCAAGGCC
GCTCTCGAAG CTGCCGAGTC CCGCGGTTTC CCGGAGTGGA TCTCCGTGGA CGTCAAGGAA
GGCAAGGGCA CGTTCAAGGC CATGCCGCAG CGCTCCGAAT TGCCGGCGAC CCTGAACGAA
GGTCTCGTCA TCGAACTTTA CTCGAAGTAA
 
Protein sequence
MARNLDPKCR QCRREGEKLF LKGEKCFTDK CAIERRSYAP GQHGQKSGAR LSDYGVHLRA 
KQKIRRVYGV LEGQFRKTFA EADRRKGQTG ENLLQLLEAR LDSVAYRMGF GASRSESRQV
VRHNGILVNG KRVNIPSFIV KPGDVVQLTD RARASLRCKA ALEAAESRGF PEWISVDVKE
GKGTFKAMPQ RSELPATLNE GLVIELYSK