Gene Daro_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0333 
SymbolrpsH 
ID3567079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp372405 
End bp372800 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content56% 
IMG OID637678775 
Product30S ribosomal protein S8 
Protein accessionYP_283562 
Protein GI71905975 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00000000000000752194 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000469297 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCTATGA GCGATCCGAT CGCGGACATG CTGACTCGCA TCCGCAACGC CCAGCTCGCC 
GAAAAGGCGT CTGTCTCCAT GCCCTCGTCC AAGGTAAAGG TGGCTATTGC TGCTGTGCTC
AAGGATGAAG GCTACGTCGA AGATTTTGCA GTTCGTCAGG CTGATGGCAA GGCAAATCTC
GAAATCGCAC TCAAGTATTA CGCCGGTCGT CCGGTCATTG AGCGTATTGA GCGTATTTCC
AAGCCTGGTC TGCGTATCTA CAAGGGCTGC GACGATATTC CGCGTGTCAT GAATGGTCTT
GGTGTGGCCA TCGTTTCTAC CCCGAAGGGC GTCATGACTG ACCGCAAGGC TCGCGCCAGC
AAGGTTGGCG GCGAAGTCCT TTGCATCGTG GCGTAA
 
Protein sequence
MAMSDPIADM LTRIRNAQLA EKASVSMPSS KVKVAIAAVL KDEGYVEDFA VRQADGKANL 
EIALKYYAGR PVIERIERIS KPGLRIYKGC DDIPRVMNGL GVAIVSTPKG VMTDRKARAS
KVGGEVLCIV A