| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0317 |
|---|
| Symbol | tuf |
|---|
| ID | 3569771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 364312 |
|---|
| End bp | 365502 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637678759 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_283546 |
|---|
| Protein GI | 71905959 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 2.28692e-16 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000217605 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGG AAAAATTCGC GCGTACGAAA CCGCACGTAA ACGTTGGCAC GATTGGTCAC
GTTGACCACG GCAAGACCAC GCTGACGGCT GCGATCACGA CGGTGCTGTC CGCCAAGTTC
GGTGGCGCTG CCAAGAAATA TGATGAAATT GACGCTGCGC CGGAAGAAAA GGCCCGCGGT
ATTACGATTA ATACCGCCCA CGTCGAATAC GAAACCGCCA ACCGTCACTA CGCCCACGTT
GACTGCCCGG GCCACGCTGA CTACGTCAAG AACATGATTA CCGGTGCTGC CCAGATGGAC
GGCGCGATCC TGGTCTGTTC CGCCGCTGAC GGCCCGATGC CGCAAACCCG CGAACACATC
CTGCTGGCTC GCCAGGTTGG TGTGCCGTAC GTTCTGGTGT TCATGAACAA GTGCGATATG
GTTGACGACG CCGAGCTGCT CGAACTGGTC GAAATGGAAC TGCGCGAGCT GCTCTCCAAG
TACGACTTCC CGGGCGACGA CACCCCGATC ATTCACGGCT CCGCCCTGAA GGCCCTCGAA
GGCGACCAAT CCGAAATCGG CGAACCGTCG ATCTTCCGTC TGGCCGACGC CCTGGACTCC
TACATCCCTG ATCCGGAGCG TGCCATCGAT CAGCCGTTCC TGATGCCGGT TGAAGACGTC
TTCTCCATCT CTGGTCGCGG TACCGTGGTG ACCGGTCGTG TTGAGCGCGG CATCGTCAAG
GTTGGCGAAG AAATCGAAAT CGTTGGTATC CGCCCGACCG TCAAGACCAT CTGTACCGGT
GTTGAAATGT TCCGCAAGCT GCTCGACCAA GGTCAGGCTG GCGACAACAT TGGCGCCCTG
CTGCGTGGTA CCAAGCGTGA AGACGTCGAG CGTGGTCAGG TGCTGTGCAA GCCGGGTTCT
GTCAAGCCGC ACACCCACTT CACCTCTGAA GTGTACATCC TGTCCAAGGA TGAGGGTGGC
CGTCACACCC CGTTCTTCAA CGGCTACCGT CCGCAGTTCT ACTTCCGCAC GACCGACGTG
ACTGGCTCCA TCGAGCTGCC GGAAGGCACC GAAATGGTTA TGCCGGGCGA CAACATCGCC
ATGACGATCA AGCTGATTGC GCCGATCGCC ATGGAAGAAG GTCTGCGCTT CGCCATCCGT
GAAGGCGGTC GTACCGTCGG CGCCGGCGTC GTCGCCAAGA TCATCGAGTA A
|
|---|
| Protein sequence | MAKEKFARTK PHVNVGTIGH VDHGKTTLTA AITTVLSAKF GGAAKKYDEI DAAPEEKARG
ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY VLVFMNKCDM VDDAELLELV EMELRELLSK YDFPGDDTPI IHGSALKALE
GDQSEIGEPS IFRLADALDS YIPDPERAID QPFLMPVEDV FSISGRGTVV TGRVERGIVK
VGEEIEIVGI RPTVKTICTG VEMFRKLLDQ GQAGDNIGAL LRGTKREDVE RGQVLCKPGS
VKPHTHFTSE VYILSKDEGG RHTPFFNGYR PQFYFRTTDV TGSIELPEGT EMVMPGDNIA
MTIKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIE
|
|---|
| |