Gene Daro_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0316 
Symbol 
ID3569770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp362203 
End bp364296 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content56% 
IMG OID637678758 
Producttranslation elongation factor 2 (EF-2/EF-G) 
Protein accessionYP_283545 
Protein GI71905958 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000146619 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000265017 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCACGTA AAACTCCCAT CGAGCGCTAC CGCAATATCG GTATCAGCGC GCACATCGAC 
GCCGGCAAGA CGACGACGAC TGAACGTATC CTTTACTACA CCGGTGTTAA TCACAAGATC
GGTGAAGTTC ATGATGGCGC CGCCACCATG GACTGGATGG AGCAGGAGCA GGAGCGTGGT
ATCACCATTA CCTCTGCTGC GACCACCTGT TTCTGGAGTG GTATGGACAA ACAGTTCCAG
CCGCACCACA TCAACATCAT CGACACCCCG GGTCACGTTG ACTTCACTAT TGAAGTTGAA
CGTTCTATGC GTGTTCTCGA CGCTGCTTGC ATGGTTTACT GTGCCGTGGG TGGTGTTCAG
CCCCAGTCGG AAACTGTTTG GCGTCAAGCC AACAAGTACG GCGTGCCACG TCTGGCCTTC
GTGAACAAGA TGGACCGTTC CGGTGCCAAC TTCTTCAAGG TCGTTGATCA GCTCAAGCTG
CGTCTGAAGG CCAACCCGGT GCCCATCGTC ATTCCTATCG GTGCTGAAGA CAAGTTCGAA
GGTGTGGTTG ATCTGATCAA GATGAAAGCC ATCTACTGGG ATGAGGCTTC GCAGGGCATG
AAGTACGATG CCCGTGAAAT CCCGGCGGAG CTGGCTGATG ATGCCGCCAC TTGGCGTGAG
CAGATGGTTG AAGCAGCCGC TGAAGCCTCT GAAGAGCTGA TGAACAAGTA CCTTGAAGAA
GGTGATCTGT CTGAGGCTGA CATCATTCTT GGTCTGCGTA CCCGCACCAT CGCCTGTGAA
ATCCAGCCGA TGCTCTGTGG TACCGCCTTC AAGAACAAGG GCGTGCAGAA GATGCTCGAC
GCCGTTATCG AGTTGTTGCC GTCGCCGGTA GATATCCCGC CGGTCAAGGG TATTCTCGAA
AACGAGTCCG AGGGCGAGCG CCGTGCTGCT GATGACGAGG CTTTCTCGGC TCTGGCCTTC
AAGATCATGA CCGACCCGTT TGTTGGTCAG CTGATCTTCT TCCGTGTTTA TTCCGGCGTG
ATCAATTCCG GCGATACCGT CTACAACCCG GTCAAGGGTC GTAAGGAGCG TCTGGGTCGC
ATCCTGCAGA TGCACGCCAA TCAGCGTGAA GAAATCAAGG AAGTGCGCGC TGGCGACATC
GCTGCTGCCG TGGGTCTGAA GGAAGCCACC ACTGGTGATA CGCTGTGTGA TCCGGCCAAG
GTCATCACCC TTGAGCGCAT GGTCTTCCCG GAGCCGGTGA TTCACGTTGC CGTCGAGCCG
AAGACCAAGG CTGACCAGGA AAAGATGGGG CTGGCGTTGG GTCGTTTGGC TCAGGAGGAT
CCGTCCTTCC GCGTCCGCAC TGACGAAGAA TCCGGTCAAA CCATTATTTC CGGTATGGGC
GAATTGCACC TGGAAATCCT GGTCGATCGT ATGCGTCGCG AATTTAACGT TGATGCTTCT
GTTGGTGCAC CTCAGGTTGC CTATCGCGAA TGCATCAAGA AGTCGGTCGA ACAGGAAGGC
AAGTTCGTCA AGCAGTCCGG TGGTCGTGGT CAGTTCGGTC ACGTCTGGCT CAAGATCGAG
CCGAACGAAG CCGGCAAGGG CTACGAATTC ATCGACGCCA TCAAGGGCGG TGTGGTTCCC
CGTGAATTCA TCCCGGCGGT TGACAAGGGG CTGCGTGATG CAGTGACCAG CGGCGTTTTG
GCTGGCTTCC CGGTGGTGGA CGTGAAGTTC ACGCTGTTCG ACGGTTCCTA TCACGACGTT
GACTCCAACG AAAATGCGTT CCGTATGGCT GCTTCGATGG CCTTCAAGGA AGGTATGAAG
AAGGCCAGTC CGACGTTGCT TGAGCCGATG ATGGCGGTTG AAGTTGAAAC GCCTGAGGAG
TACATGGGTA ACGTGATGGG CGATCTTTCG TCCCGCCGCG GCATCGTTCA GGGTATGGAA
GATCAGGTTG GCGGCATCAA GGTCGTCAAG GCTGAAGTCC CGCTGTCCGA GATGTTTGGT
TACTCGACCT CCGTGCGCTC GTTGTCGCAA GGTAGGGCTA CCTACTCGAT GGAATTCAAG
CACTACACCG AAGCGCCGAA GAACGTCGCT GAGGCCGTCA TTAACAAGAA GTAA
 
Protein sequence
MARKTPIERY RNIGISAHID AGKTTTTERI LYYTGVNHKI GEVHDGAATM DWMEQEQERG 
ITITSAATTC FWSGMDKQFQ PHHINIIDTP GHVDFTIEVE RSMRVLDAAC MVYCAVGGVQ
PQSETVWRQA NKYGVPRLAF VNKMDRSGAN FFKVVDQLKL RLKANPVPIV IPIGAEDKFE
GVVDLIKMKA IYWDEASQGM KYDAREIPAE LADDAATWRE QMVEAAAEAS EELMNKYLEE
GDLSEADIIL GLRTRTIACE IQPMLCGTAF KNKGVQKMLD AVIELLPSPV DIPPVKGILE
NESEGERRAA DDEAFSALAF KIMTDPFVGQ LIFFRVYSGV INSGDTVYNP VKGRKERLGR
ILQMHANQRE EIKEVRAGDI AAAVGLKEAT TGDTLCDPAK VITLERMVFP EPVIHVAVEP
KTKADQEKMG LALGRLAQED PSFRVRTDEE SGQTIISGMG ELHLEILVDR MRREFNVDAS
VGAPQVAYRE CIKKSVEQEG KFVKQSGGRG QFGHVWLKIE PNEAGKGYEF IDAIKGGVVP
REFIPAVDKG LRDAVTSGVL AGFPVVDVKF TLFDGSYHDV DSNENAFRMA ASMAFKEGMK
KASPTLLEPM MAVEVETPEE YMGNVMGDLS SRRGIVQGME DQVGGIKVVK AEVPLSEMFG
YSTSVRSLSQ GRATYSMEFK HYTEAPKNVA EAVINKK