| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0298 |
|---|
| Symbol | |
|---|
| ID | 3569748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 341284 |
|---|
| End bp | 342204 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637678736 |
|---|
| Product | PAS |
|---|
| Protein accession | YP_283527 |
|---|
| Protein GI | 71905940 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2203] FOG: GAF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 0.17178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.370219 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAC TGCATCAACC CGCGAGTGGG GCAACCCTGA TGTCACCAGC TGCGTTACAG
GAAGGCATCG CCAGCCTGTC GCGCGGGGTC TATTTCAGGG AGGCCTCCCT GAGCATGATG
CTCAGCATCC TGACCGAATC GGCTGCACAA ATGTCCGGGG TTGAGCGCGT CAGCATCTGG
GCTTTGACCA ATAGTCAGAG CGAACTGACA TGCCTCGATC TCTATGAACA AGCCTCCGGG
CAGCACAGCA AGGGCGCGAG CATTGATGCC GGAGGGTATC CCGTCTATTT CCGCGCCCTT
CAGGCCGGTA CGGCCATTAC GGCCGATGAC GCCTATCTGC ACCCGTTGAC GGCCGAATTT
GCCAGCGATT ATTTGCCGCG CCACAAGGTT ACGGCAATGC TCGATACGCC GATCCACATT
CGCGGTGAAT TGCAAGGAGT GCTCTGTCTC GAACAGGTTG CTTCCCGTCA GCCCTGGACC
GCGGCGCATC AGCTTTTTGC TCAGGCCGTC GCCAATCTCG TGACTCTCGC CTTGGTCGAA
TACGAAGCGG AAGAAGCGCG GCGGGCCGCC AAGGAAGCCA GCGAGCGCCT GCGCGCCGTG
TTTGATGCAT CAAGGGATGC GCTTTTCCTG GCGGATCGCG ATAGTGGCGA GATTCTGGAT
GTCAATCGTC AGGCCGAAGC CCTGGTCGGG CGGACGCGCA ATGAATTGCT TGGTCGTCAC
CAGGGAAGCC TGCATCCGGC CGAGTTTCAG AAAAGCATGC TCGGTGAGTT TCGCCAGATG
TTCGATGGCT GCCAGTCTCT GACTTTGGCC AGCCAGGTGC AGCACAGCGA CGGCCGCAAG
CTTCCGGTCG AGATAACCGC CGAGGTTGCC GATCTGAGTG ATGGCCGACG GCTCGCCTTG
AGTGTTTTTC GGCCGGTCTA G
|
|---|
| Protein sequence | MGKLHQPASG ATLMSPAALQ EGIASLSRGV YFREASLSMM LSILTESAAQ MSGVERVSIW
ALTNSQSELT CLDLYEQASG QHSKGASIDA GGYPVYFRAL QAGTAITADD AYLHPLTAEF
ASDYLPRHKV TAMLDTPIHI RGELQGVLCL EQVASRQPWT AAHQLFAQAV ANLVTLALVE
YEAEEARRAA KEASERLRAV FDASRDALFL ADRDSGEILD VNRQAEALVG RTRNELLGRH
QGSLHPAEFQ KSMLGEFRQM FDGCQSLTLA SQVQHSDGRK LPVEITAEVA DLSDGRRLAL
SVFRPV
|
|---|
| |