| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0296 |
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| Symbol | |
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| ID | 3569746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 337720 |
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| End bp | 340830 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637678734 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_283525 |
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| Protein GI | 71905938 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.100092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.521043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGAGT CCCTCGTCCG TAGTGCGCTT AAGCAGCGCC TGATCGTCGC GGTCATCGCG
GCCGTTCTCT TTTTCTTCGG GCTGGATGCG GCGCGCAAGC TGTCGGTCGA CGCCTTCCCA
GACGTGACCA ATGTCCAGGT CCAGATTGCG ACCGAGGCCA CTGGCCGTTC GCCGGAAGAG
GTCGAACGCT TCGCCACCGT GCCGCTGGAG GTCGCCATGA CTGGCCTGCC AGGGCTGGAA
GAAATGCGCT CGCTGAATAA GCCAGGCCTG TCGCTGATTA CCCTGGTATT CAATGACAAG
ACCGATGTCT ATTTTGCTCG TCAACTGGTC ATGGAGCGCC TGCTGGAAGT CGGCTCGCGC
CTGCCGCAGG GCATCACGCC GGTGCTGGGG CCGGTATCGA CTGGCTTGGG CGAGGTCTAT
CAATACACGC TGGAGCGGGC AGATGATGGT GACCGGACTC TGAGCGAAGA GGAATTGATG
AAGCGCCGGA TCGCCCAGGA CTGGGTGGTT CGTCCGCTGC TGCGTTCGAT TCCGGGCGTG
GCGGAAATCA ATTCGCAAGG TGGTTATGCC AAGCAGTATC ACGTGCTGGT CAATCCGGAC
AAATTGCGCC ACTTCGGGCT GTCGGTGGCC GATGTCTATC AGGCGGTCGG GCGCAACAAT
GCCAACGCCG GTGGTGGGGT GTTGCCGCAG TATGCCGAGC AATACCTGAT CCGCGGCATT
GGTCTGGTGC GCGATATCGA AGACCTGCGG GCCATCGTTC TTCGTGAGAG GGATGGCGTC
CCGGTTTATG TGCGCGATGT GGCTGACGTG CAGATCGGCC ATGACGTCCG CCAGGGCGCC
GTGATCAAGA ATGGCGTGAC CGAGGCGGTC GGCGGCGTGG TCATGATGAT CGCCGGCGGC
AACGCCAAGG AAGTGGTCGG CCGCATCAAG GCGCGGGTCG AGGAGATCAA CCGTAAGGGC
ATGTTGCCCG ATGGCTTGAA GATAGAGCCT TATTACGACC GCTCCGAGCT GGTCGATGCG
GCGCTGTGGA CGGTCACCAA GGTGCTGCTC GAAGGCGTGG CGCTGGTTGT TGTCGTGCTC
TTCCTGTTCC TTGGCGATGT CCGTTCCTCG CTGATCGTCG TCGGCACGCT GGTGCTGACG
CCGTTGCTGA CCTTCATTGC GATGAACAAG CTGGGCATTT CGGCCAACCT GATGTCGCTG
GGCGGCCTGG CCATCGCCAT CGGCCTGATG GTCGACGGCT CGGTGGTCGT CGTCGAAAAC
GCCTACCTGC AACTGGGGCG GATGCTCAAG TCCGGTGAAA GTTCGACCCG GGTGATCCTG
CGCGCCGTGG TCGAGGTGGC GACGCCGGTC ATCTTCGGGG TGGGTATCAT CATCCTGGTC
TTTCTGCCCT TGATGACGCT ACAGGGCATG GAAGGCAAGA TGTTTGCACC GCTCGCCTAC
ACCATTGCCA TTGCGCTGGC GATTTCGCTG ATCCTGTCGC TGTCGCTGAC GCCGGTGATG
TCGACTTATC TGCTCAAGCC GCCGGCCCAT GACGGTGACC ACGACACCCG ACTGATCGCG
GTCATGAAGC AGCGCTATCT GAAAATGTTG CACTGGGCGC TCGGCAACGA AAAAAAGACG
GTGACCCTGG CGATCATTGC CTTTGTCGTC ACCGTCAGCC TGCTGCCTTT CCTCGGCACG
GCCTTCATTC CGGAAATGAA AGAGGGCTCC GTGGTGCCCG GTATTAACCG CGTGCCCAAC
ATCTCGCTCG ACGAGTCGAT CAAGATGGAA ATGGAGGCCA TGCGCCTGGT CATGCAGGTG
CCCGGCGTCA AGTCGGCCGT ATCCGGCGTC GGGCGCGGCG AATCGCCGGC CGACCCACAG
GGGCCAAACG AGTCGACGCC CATCGTCAGT CTGAAGCCGC GCAGCGAGTG GCCATCCGGC
TGGACGCAGG ACGATATTCA GGATGCCATG CGGGAAAAGC TGAAAGCCTT GCCGGGCGTG
CAGATTGTCA TGGCCCAGCC GATTTCTGAC CGGGTTGATG AAATGGTCAC CGGCGTGCGT
TCCGATATCG CGGTCAAGGT CTTCGGCGAT GATCTCGATC AACTGAAGAG GGTCGCCGGC
CAGATCGGCA AGGTCGCCCA ATCCTTGCAG GGGGCACAGG ATCTGCGCAT CGAGCGGATC
AGCGGCCAGC AATACCTGTC GATCGAAATC GACCGTCAGG CGATTGCCCG CCTTGGCCTG
AATGTCTCTG ACGTCAATGA CGTGCTGGAA ACGGCCGTTG GCGGCAAGGT GGCGACCGAG
ATTTTCGAAG GCGAACGGCG CTTCCCTGGC GTGGTGCGCT TGCCGGAACG TTTCCGCAAT
AACGTCGAGG CGATCTCGAA CATCCTGCTC ACTTCGCGCA ACGGGGCGCA GGCCCGGTTG
GCCGACGTGG CCAAAATCAG CGTCATGGAT GGCCCAGCAC AGATTTCGCG CGAACTTGGC
AAGCGCCGCA TCGTGATCGG GGTCAACGTC AAGGATCGCG ACTTGGGCAG CTTCGTCGCC
GAGTTGCAGC AGAAGGTTGA AAGCCAGATC ACGCTGCCGG AAGGCTACTA CCTGGAGTGG
GGGGGGCAGT TCCAGAACAT GGAGCGGGCG CTTGGCCATC TGAAGATCAT TATCCCGATC
ACCATCGCAG CGATCTTCTT CCTGCTCTTC CTGCTTTTTA ATTCGCTGCG TTTCGCTACG
CTGATCATCA CCGTGCTGCC CTTTGCTTCC ATCGGCGGTA TTGTCGGCTT GTTCGTGACC
GGGGAATATC TGTCGGTACC CGCCTCGGTC GGCTTCATCG CGCTGTGGGG GATCGCCGTG
CTCAACGGCG TGGTGCTGGT CTCCTACATT CGTGGTCTGC GCGATCAGGG GCGGAGTGTG
CGTCAGGCCG TGATCGAAGG CGCAACGCTG CGTTTCAGGC CAGTCATGAT GACGGCGACA
GTCGCCATGC TCGGCCTGAT TCCCTTCCTG TTTTCCAGCG GGCCGGGGTC TGAGGTGCAG
CGACCGCTGG CCATCGTGGT CATTGGTGGG CTGATTACCT GCACCTTGCT GACGCTGCTG
GTTTTACCCA CGATTTACCG CTGGTTTGAC GAAGATGAGG TCGAAGCATG A
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| Protein sequence | MIESLVRSAL KQRLIVAVIA AVLFFFGLDA ARKLSVDAFP DVTNVQVQIA TEATGRSPEE
VERFATVPLE VAMTGLPGLE EMRSLNKPGL SLITLVFNDK TDVYFARQLV MERLLEVGSR
LPQGITPVLG PVSTGLGEVY QYTLERADDG DRTLSEEELM KRRIAQDWVV RPLLRSIPGV
AEINSQGGYA KQYHVLVNPD KLRHFGLSVA DVYQAVGRNN ANAGGGVLPQ YAEQYLIRGI
GLVRDIEDLR AIVLRERDGV PVYVRDVADV QIGHDVRQGA VIKNGVTEAV GGVVMMIAGG
NAKEVVGRIK ARVEEINRKG MLPDGLKIEP YYDRSELVDA ALWTVTKVLL EGVALVVVVL
FLFLGDVRSS LIVVGTLVLT PLLTFIAMNK LGISANLMSL GGLAIAIGLM VDGSVVVVEN
AYLQLGRMLK SGESSTRVIL RAVVEVATPV IFGVGIIILV FLPLMTLQGM EGKMFAPLAY
TIAIALAISL ILSLSLTPVM STYLLKPPAH DGDHDTRLIA VMKQRYLKML HWALGNEKKT
VTLAIIAFVV TVSLLPFLGT AFIPEMKEGS VVPGINRVPN ISLDESIKME MEAMRLVMQV
PGVKSAVSGV GRGESPADPQ GPNESTPIVS LKPRSEWPSG WTQDDIQDAM REKLKALPGV
QIVMAQPISD RVDEMVTGVR SDIAVKVFGD DLDQLKRVAG QIGKVAQSLQ GAQDLRIERI
SGQQYLSIEI DRQAIARLGL NVSDVNDVLE TAVGGKVATE IFEGERRFPG VVRLPERFRN
NVEAISNILL TSRNGAQARL ADVAKISVMD GPAQISRELG KRRIVIGVNV KDRDLGSFVA
ELQQKVESQI TLPEGYYLEW GGQFQNMERA LGHLKIIIPI TIAAIFFLLF LLFNSLRFAT
LIITVLPFAS IGGIVGLFVT GEYLSVPASV GFIALWGIAV LNGVVLVSYI RGLRDQGRSV
RQAVIEGATL RFRPVMMTAT VAMLGLIPFL FSSGPGSEVQ RPLAIVVIGG LITCTLLTLL
VLPTIYRWFD EDEVEA
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