Gene Daro_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0293 
Symbol 
ID3570179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp334429 
End bp335307 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content61% 
IMG OID637678731 
Productheat shock protein HtpX 
Protein accessionYP_283522 
Protein GI71905935 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.985067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA TCATCCTGTT TCTCGCCACC AACCTGGCGG TCATGCTGGT TCTCAGTGTG 
GCCACCAGCC TGTTGGGCGT TAACAAGTTC CTGACAGCCA ATGGCCTGAA CGTCGGCATG
TTGTTTGTCT TTGCCGCAGT GATCGGTTTC GGTGGCGCCT TCATTTCGCT GCTGGTGTCC
AAGACCATGG CCAAGTGGAG CACTGGCGCT CGGGTCATCG AGTCACCGAG TTCATCGACG
GAGATGTGGC TGGTCGATAC GGTGGCCAAG CTGGCCAAGC GCGCCAACCT GCCGATGCCG
GAAGTGGCTA TCTACGATGG CGAGCCGAAT GCCTTCGCGA CCGGCGCGAC CAAGAACAAG
TCGCTGGTTG CCGTCTCGAC CGGCCTGCTG CAGAGCATGA CCCGCGATGA AGCCGAAGCC
GTGCTGGCCC ATGAGGTGGC CCACATCGCC AACGGCGACA TGGTCACGCT GACGCTGATC
CAGGGCGTGG TGAACACCTT CGTCGTCTTC CTGTCGCGCA TCGTCGGCTA CGTGGTCGAT
GGCTTCCTGC GTCGTGGCGA CAGCGAAAAC AGTGGCCCGG GGATTGGTTA CATGGTGACC
AGCATGATTT GTGAAGTCAT CTTCGGCCTG CTGGCCAGCA TCGTTGTGGC CTGGTTCTCG
CGTCAGCGTG AATTCCGTGC CGATGCGGGG GCGGCTGGCT TGATGGGCTC GCCGGTGCCG
ATGCAGAACG CCTTGCGTCG TCTGGGCAAC CTGCATACCG AAGCCTTGCC GCAAAACATG
GCCGCTTCAG GTATTGCCGG TGGCAAGGGG GGCTTCATGG CGCTGTTTTC CACCCACCCG
CCGCTGGAAG AACGGATTGC CGCATTGGGA GGCCGTTGA
 
Protein sequence
MKRIILFLAT NLAVMLVLSV ATSLLGVNKF LTANGLNVGM LFVFAAVIGF GGAFISLLVS 
KTMAKWSTGA RVIESPSSST EMWLVDTVAK LAKRANLPMP EVAIYDGEPN AFATGATKNK
SLVAVSTGLL QSMTRDEAEA VLAHEVAHIA NGDMVTLTLI QGVVNTFVVF LSRIVGYVVD
GFLRRGDSEN SGPGIGYMVT SMICEVIFGL LASIVVAWFS RQREFRADAG AAGLMGSPVP
MQNALRRLGN LHTEALPQNM AASGIAGGKG GFMALFSTHP PLEERIAALG GR