Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0290 |
Symbol | |
ID | 3570176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 331363 |
End bp | 332238 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637678728 |
Product | branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase |
Protein accession | YP_283519 |
Protein GI | 71905932 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.736627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCCT ACGTCGCCGA TCCCGTCTAC CTGAATGGCC GTTTCCTGCC GTTGGCGGAA GCGGGTATTT CCCCACTCGA CCGGGGTTTT CTATACGGCG ACGGCGTCTA TGAAGTGATC CCGGTCTATT CCCGCCGGGC TTTCCGCATC GACGAACATG TCAAGCGTCT GCAAGCGACA CTGGACGGCA TCAAGCTGGC CAACCCGCTG ACCGCCGACG GCTGGAAGGA AGTCATTGCC AAGCTGATCG AAACTGCCCC CTGGGACGAC CAGTCGATCT ATCTGCAAGT CACCCGCGGC GCCGACGACA AGCGTGACCA CGCCTTCCCG CCGGCCTCGA TACCATCGAC AGCCTTTGCC TTCGCTTCGC CGCTGGTCAC CACGCCCGCC GAGGTCCGCG CCAAGGGCGT CGCCGCGATC ACCGTGCCCG ATCTTCGCTG GTCGCGCTGC GACCTCAAGG TCATCTCGCT GCTCGCCAAC GTGCTGGCCC GCCAGCAAGC CGTCGATCAA GGCTGTGCCG AGGCACTGTT GATTCGCGAC GGTTTCATGA AAGAAGGCGC TGCCTCCAAC ATCTTCATCG TCAAGGACGG CGTGCTGGTC GCCCCGCCCA AGACGCACCT GATGCTGCCG GGCATTACCT ACGACGTGAT CCTCGAACTG GCGGCGACCC ACCAGCAGGC TTTGGCAGTA CGCGAAATCA GCGAAACTGA ACTTCGTGGC GCCGACGAGG TCTGGATGAC CTCATCGACC AAGGAAATCC TGGCAATCAC GACGCTCGAT GGCGAGCCAG TCGGCACCGG CAAACCCGGC CCGTTCGGCG AGCAGATGTG GCAGTGGTAT CAGGATTTCA AGAACACCGT AATGCGTAAA GGCTGA
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Protein sequence | MTPYVADPVY LNGRFLPLAE AGISPLDRGF LYGDGVYEVI PVYSRRAFRI DEHVKRLQAT LDGIKLANPL TADGWKEVIA KLIETAPWDD QSIYLQVTRG ADDKRDHAFP PASIPSTAFA FASPLVTTPA EVRAKGVAAI TVPDLRWSRC DLKVISLLAN VLARQQAVDQ GCAEALLIRD GFMKEGAASN IFIVKDGVLV APPKTHLMLP GITYDVILEL AATHQQALAV REISETELRG ADEVWMTSST KEILAITTLD GEPVGTGKPG PFGEQMWQWY QDFKNTVMRK G
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