Gene Daro_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0267 
Symbol 
ID3569698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp309198 
End bp312650 
Gene Length3453 bp 
Protein Length1150 aa 
Translation table11 
GC content64% 
IMG OID637678705 
Productindolepyruvate ferredoxin oxidoreductase 
Protein accessionYP_283496 
Protein GI71905909 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC TCGCTCTGCC GGCAGGCCTC GCCGCGACGC TGGACGACAA ATACACCCGC 
AGTTCCGGCC GCGTCTTCCT GACCGGCACC CAGGCCCTGA TCCGCCTGCC CATGCTGCAA
CGCGAACGCG ATCTGGCGGC CGGGCTGAAC ACCGCCGGTT TCATCTCCGG CTATCGCGGC
AGCCCGCTTG GCAACCTCGA TCTCGGCCTA TGGAAAGCCA AAGCGCACCT CGCCGAGCAT
CACATCACCT TCCAGCCCGG CATCAATGAA GACCTTGCCG CCACAGCCGT CTGGGGCAGC
CAGCAGGTCA ATCTCTTTCC CGGAGCGCAA TACGATGGCG TGTTCGGCCT GTGGTACGGC
AAGGGGCCAG GCGTGGACCG CTGCGGCGAT GTCTTTCGCC ATGCCAACGC GGCCGGCTCA
TCGAAATTCG GCGGCGTGCT GGTCATCGCC GGCGACGACC ACGCCGCCAA GTCCTCGACC
CTGCCGCACC AGACCGAGCA TGTTTTCAAG GCACTGATGA TGCCGGTGCT CTACCCGGCC
AATGTGCAGG AATACCTCGA TTTCGGCCTG CACGGCTGGG CGATGAGCCG CTATTCCGGC
TGCTGGGTCG CATTCAAGGC GCTGGCCGAC ACGGTGGAAA CCTCGGCCTC GGTCACTATC
GACCCGGCTG CGCTTACCCC GATTATTCCG CCAGATTTCA AATTGCCACC GGATGGCCTG
AATATCCGCT GGCCCGACCC GCCGCTGGTT CAGGAAGCCC GGTTGCTCAA CCACAAGCTC
TACGCCGCGC TGGCCTATTG CCGGACCAAC GGGCTAAACA AGCTGATCAT CGATTCGCCG
ACCCCCAAGC TGGGAATCCT GACCGCCGGC AAGAGCTATC TCGACGTCCG GCAGGCGCTG
GATGAACTGG GCATCGATGA CCAACTGGCC GCCGAAATCG GCATCCGACT GTACAAGGTC
GGCATGGTCT GGCCGCTGGA ACCGGAAGGC GTGCGGCAGT TTGCCGAGGG GCTGGAGGAA
ATCCTCGTTG TCGAGGAAAA ACGCCAGCTG CTCGAATACC AGCTCAAGGA AGAGCTCTAC
AACTGGCGTG ATGATGTCCG CCCCCGCGTC ATCGGCAAGT TCGACGAAAT CGGCGAGTGG
TCGGAAGGCA ACTGGCTGCT GCCGGCCGCC GGCGAGCTAC CGGTCGCCAC CATCGCCCGC
GTCATCGCCG AGCGCATCGG CCGCTTCTTC ACCTCGCCAA CCATCGCTGC CCGCCTGAAA
GTCATCGCCG ACAAGCAGAA AGCCGCCCAG ACGCCCATCG TGCTCGCCGA GCGCAAGCCG
CACTTCTGCT CCGGCTGCCC GCACAACAGT TCGACCAAGG TGCCGGAGGG CTCGCGCGCC
GTCGCCGGTA TCGGCTGCCA TTACATGGTG ACGTGGATGG ATCGCAGCAC CTCGACCTTC
ACCCACATGG GCGGCGAAGG CGTGCCCTGG GTCGGTCAGG CGCCCTTCAC CAGCGAAAAG
CACATCTTCG CCAACCTCGG CGACGGCACC TATTTCCACT CCGGCCTGCT CGCCATCCGG
CAATCCATCG CCGCCAAGGT GCCGATCACC TACAAGATCC TCTACAACGA TGCCGTGGCG
ATGACCGGCG GCCAGCCGGT CGACGGCATC CTCAGCGTCG CCCGCATCAC CCGCCAGCTG
GAGGCCGAGG GCATAGCAAA GATGGTCATC GTCGCGGCCG AACCGGAGAA GTACGCCGAG
ATCGTCGACC TCGCCCCCAA TGTGCCGATC CGCCACCGCG ATGAACTGGA CGCCGTGCAG
CGCGAACTGC GCGACTATCC CGGCGTCTCG ATCCTGATCT ACGACCAGGT CTGCGCCACC
GAAGCCCGCC GCCGGCGCAA GCGCGGCAAG ATGCCGGCCA TCAGCCAGCG CGTCTTCATC
AACGAAGCCG TTTGCGAAGG CTGTGGCGAT TGCTCGGTGC AATCCAACTG CCTGTCCGTC
GTGCCGGTCG AAACAGCCTT TGGCACCAAG CGGCAGATTG ATCAATCGTC GTGCAATCAG
GACTTTTCCT GCCTGAAAGG CTTCTGCCCC AGCTTCGTCA CCGTCGAAGG CGGCAAGTTG
AAAAAAGGCA AGGCCGCCCA GCCGGATTCG GTGGATGCCG AAGACTGGCC GCTTTTGCCG
GCCCCCGTTC TGCCTTCGAC GGCCCAGCCC TACAACCTGC TGATCACCGG CGTCGGCGGC
ATGGGCGTCA TCACCCTCGG CGCCCTGGTC GGCATGGCCG CCCACCTCGA CGGCAAGGGC
ATCTCGACGC TCGACATGAC CGGACTGGCG CAGAAGTACG GTGCCGTCTT TTCCCACCTG
CGCATCGCCG ACCGGCCGGA AGACATCCAC GCTGCCCGCA TCGCCACCGG TGAGGCACAT
GCCGTTCTTG GCGGCGATCT GGTCGTCAGC GCCGGCAGCG AGGCGCTGTC CAAGATGCTC
GAAGGACGCA CCCGAGCTGT CGTCAGTTGT ACCGACACGC CGACCGCCGA CTTCACCCGC
AACCGCGACT GGCACTTTCC GCTGCCCGGG CTGCAAAAAA GCCTGACCGA AACGCTGGGC
AGCGCAGCGG TCGATTTCAT CGATGCCCAG CATCTTGCCA CCCGGCTGAT GGGCGACGCG
CTCTACGCCA ACATGCTGCT CCTCGGCTAC GCCTGGCAAA AAGGTCTGGT ACCGGTTTCC
GCCGCCGCAC TCGAGCAGGC CATCGAACTC AATGGCGCCG CAGTCACCGC CAACCGCGAA
GCCTTCCTGT GGGGGCGGCG GGCAGCAGTC GCCCCGGAGA AAGTGGCCAA AATTGCTGGT
CCGCTCGGCG GCCAACCCTT CGTCGAACTC ACACTGGACG AGCTGATCGC CAGCCGCATC
GCCCATCTCA CGGCCTATCA GGATGCCAGC CTGGCCCACC GCTACGAAAA CCGGCTGGCC
AGCATCCGCG CCATCGGCAA CGAGACTCTG ACGCGCACGG TCGCCACGCA ATACGCCCGC
CTGCTCGCCC CCAAGGACGA ATATGAAGTC GCACGCCTGT ATGCCGCCAG CGATTTCCGG
CAACGGCTGG CCGACACTTT CGATGGCGAC GTCCAGCTTG CCTTCCACCT CGCACCACCA
CTTTTTTCCA AACCCGGCAG TGACGGCCGA CCAAAGAAAA TCCGCTTCGG CCCCTGGCTG
ATGCCAGTGC TCGGCCTTCT GGCCAAGGCA AGAAGGCTGC GCGGCAGTTG GCTCGATCCT
TTCCGGTTTG GCCACGAAAA AGCCGCAGAG CGCAGCCTGT TAGCCGACTA CGAAGCCGAT
CTTGATCTGA TCAGCAGCCA CCATAGCGCC GACAGTACAT TGGCACTGGC CACGTGGCCG
GCCGAGGTCA GAGGCTTCGG CCCGGTCCGC GCCGCGGCCG AGAGACAAGC CAGACAGGCA
AGAGAAAGGG CGAGAACGGC CTTGATGGCA TAA
 
Protein sequence
MSNLALPAGL AATLDDKYTR SSGRVFLTGT QALIRLPMLQ RERDLAAGLN TAGFISGYRG 
SPLGNLDLGL WKAKAHLAEH HITFQPGINE DLAATAVWGS QQVNLFPGAQ YDGVFGLWYG
KGPGVDRCGD VFRHANAAGS SKFGGVLVIA GDDHAAKSST LPHQTEHVFK ALMMPVLYPA
NVQEYLDFGL HGWAMSRYSG CWVAFKALAD TVETSASVTI DPAALTPIIP PDFKLPPDGL
NIRWPDPPLV QEARLLNHKL YAALAYCRTN GLNKLIIDSP TPKLGILTAG KSYLDVRQAL
DELGIDDQLA AEIGIRLYKV GMVWPLEPEG VRQFAEGLEE ILVVEEKRQL LEYQLKEELY
NWRDDVRPRV IGKFDEIGEW SEGNWLLPAA GELPVATIAR VIAERIGRFF TSPTIAARLK
VIADKQKAAQ TPIVLAERKP HFCSGCPHNS STKVPEGSRA VAGIGCHYMV TWMDRSTSTF
THMGGEGVPW VGQAPFTSEK HIFANLGDGT YFHSGLLAIR QSIAAKVPIT YKILYNDAVA
MTGGQPVDGI LSVARITRQL EAEGIAKMVI VAAEPEKYAE IVDLAPNVPI RHRDELDAVQ
RELRDYPGVS ILIYDQVCAT EARRRRKRGK MPAISQRVFI NEAVCEGCGD CSVQSNCLSV
VPVETAFGTK RQIDQSSCNQ DFSCLKGFCP SFVTVEGGKL KKGKAAQPDS VDAEDWPLLP
APVLPSTAQP YNLLITGVGG MGVITLGALV GMAAHLDGKG ISTLDMTGLA QKYGAVFSHL
RIADRPEDIH AARIATGEAH AVLGGDLVVS AGSEALSKML EGRTRAVVSC TDTPTADFTR
NRDWHFPLPG LQKSLTETLG SAAVDFIDAQ HLATRLMGDA LYANMLLLGY AWQKGLVPVS
AAALEQAIEL NGAAVTANRE AFLWGRRAAV APEKVAKIAG PLGGQPFVEL TLDELIASRI
AHLTAYQDAS LAHRYENRLA SIRAIGNETL TRTVATQYAR LLAPKDEYEV ARLYAASDFR
QRLADTFDGD VQLAFHLAPP LFSKPGSDGR PKKIRFGPWL MPVLGLLAKA RRLRGSWLDP
FRFGHEKAAE RSLLADYEAD LDLISSHHSA DSTLALATWP AEVRGFGPVR AAAERQARQA
RERARTALMA