| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0254 |
|---|
| Symbol | |
|---|
| ID | 3569646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 296835 |
|---|
| End bp | 297710 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637678692 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_283483 |
|---|
| Protein GI | 71905896 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 0.59163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCTC GCTCTTTCTC TCCGTCCCAT GAATCGGAAA CGATGATGAA TACACAAACT
GCCGCTGCCG TGCCCGACAA CTACCTGAGC ATCAACAACA TTGAGGTCAT CTACGACCAC
GTGATCCTGG TGCTCAAGGG CGTGTCGCTG AACGTGCCGA AAGGCAAGAT CGTCGCCTTG
CTCGGTGCCA ACGGTGCCGG CAAATCGACG ACCCTGAAGG CGATTTCCAA CCTGCTGCAT
GCCGAACGCG GCGATGTGAC CAAGGGTTCG GTCGAATACA AAGGTAATCG TATCGACCAG
CTGACTCCGA ACGAACTGGT CAAGCGCGGT GTCATTCAGG TCATGGAAGG GCGCCATTGT
TTCGGCCACC TGACCATCGA GGAAAACCTG CTGACCGGCG CCTACACCCG CTCGATTTCG
CGCGGCGAGT TGAAAGACAG CCTGGAAAAG GTCTATCACT ACTTCCCGCG CCTGAAGACG
CGACGCACCT CGCAGGCCGG CTATACCTCC GGTGGCGAGC AGCAGATGTG CGCGATCGGC
CGGGCGCTGA TGGCCAAGCC GGAAATGATC CTGCTCGACG AACCGTCGAT GGGCCTGGCA
CCGCAGATCG TCGAGGAAAT CTTCGAGATC GTGAAGGACC TGAACACCCG AGAGAACGTC
AGTTTCCTGC TGGCTGAGCA GAACACCATG GTGGCGCTGC GTTATGCCGA CTTCGGGTAC
ATCTTGGAAA ACGGCCGGGT GGTGATGGAA GGGGACGCGG AAGATCTGCG GACCAATGAG
GATGTTAAGG AGTTCTATCT GGGGCTGAGT TCAGCTGGCC GAAAATCCTT CAAGGACGTA
AAGCACTATC GACGCCGCAA ACGCTGGCTG TCTTAA
|
|---|
| Protein sequence | MSPRSFSPSH ESETMMNTQT AAAVPDNYLS INNIEVIYDH VILVLKGVSL NVPKGKIVAL
LGANGAGKST TLKAISNLLH AERGDVTKGS VEYKGNRIDQ LTPNELVKRG VIQVMEGRHC
FGHLTIEENL LTGAYTRSIS RGELKDSLEK VYHYFPRLKT RRTSQAGYTS GGEQQMCAIG
RALMAKPEMI LLDEPSMGLA PQIVEEIFEI VKDLNTRENV SFLLAEQNTM VALRYADFGY
ILENGRVVME GDAEDLRTNE DVKEFYLGLS SAGRKSFKDV KHYRRRKRWL S
|
|---|
| |