Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0250 |
Symbol | |
ID | 3569642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 292643 |
End bp | 293425 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637678688 |
Product | ABC transporter related |
Protein accession | YP_283479 |
Protein GI | 71905892 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 0.830264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA AAATAGGCGA CGTCATTCTC GACCTGCAGA ACATTTCCCT GCGCTTCGGT GGCGTCAAGG CGCTGACCGA CATTTCCTTC AACGTCCGCC AGCACGAAAT TCGCGCCATC ATCGGCCCGA ACGGTGCCGG CAAGAGCTCG ATGCTCAACG TCATCAACGG TGTGTATCAC CCGCAGGAGG GCAAGATTTT CTGGCACGGT AACGAGCGCA AGCGCATGGA GCCGCACATG GCGGCCCAGC AGAACATTGC GCGCACCTTC CAGAATATCG CGCTCTTCAA GGGCATGAGC GTACTCGACA ACATCATGAC CGGGCGCATC ACCAAGATGA AGGCCAACTT CATCGAGCAT GCGCTGTGGT TCGGCCGGGC CAAGAACGAG GAACTGGAGC ATCGCAAGAA AGTCGAGGAG GTGATCGATT TCCTCGAAAT CCAGCACATC CGCAAGACGC CGGTCGGCCG CCTGCCCTAT GGCCTGCAAA AGCGCGTCGA ACTCGGTCGC GCCCTGGCTG CCGAGCCCTC AATGTTGCTG CTCGATGAGC CGATGGCCGG CATGAACGTC GAGGAGAAAC AGGACATGTG CCGTTTCATC CTTGATGTGA ACGACCAGTT CGGCACCACC ATCGTGCTGA TCGAGCACGA CATGGGCGTG GTGATGGATA TCTCCGACCG CGTCGTCGTG CTCGACTACG GCAAGAAGAT CGGCGATGGC GTCCCTGACG AAGTTAAGAA CAACGAAGAC GTCATCAAGG CGTACCTCGG TGCTGGCCAT TAA
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Protein sequence | MSKKIGDVIL DLQNISLRFG GVKALTDISF NVRQHEIRAI IGPNGAGKSS MLNVINGVYH PQEGKIFWHG NERKRMEPHM AAQQNIARTF QNIALFKGMS VLDNIMTGRI TKMKANFIEH ALWFGRAKNE ELEHRKKVEE VIDFLEIQHI RKTPVGRLPY GLQKRVELGR ALAAEPSMLL LDEPMAGMNV EEKQDMCRFI LDVNDQFGTT IVLIEHDMGV VMDISDRVVV LDYGKKIGDG VPDEVKNNED VIKAYLGAGH
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