Gene Daro_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0250 
Symbol 
ID3569642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp292643 
End bp293425 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content58% 
IMG OID637678688 
ProductABC transporter related 
Protein accessionYP_283479 
Protein GI71905892 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value0.830264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA AAATAGGCGA CGTCATTCTC GACCTGCAGA ACATTTCCCT GCGCTTCGGT 
GGCGTCAAGG CGCTGACCGA CATTTCCTTC AACGTCCGCC AGCACGAAAT TCGCGCCATC
ATCGGCCCGA ACGGTGCCGG CAAGAGCTCG ATGCTCAACG TCATCAACGG TGTGTATCAC
CCGCAGGAGG GCAAGATTTT CTGGCACGGT AACGAGCGCA AGCGCATGGA GCCGCACATG
GCGGCCCAGC AGAACATTGC GCGCACCTTC CAGAATATCG CGCTCTTCAA GGGCATGAGC
GTACTCGACA ACATCATGAC CGGGCGCATC ACCAAGATGA AGGCCAACTT CATCGAGCAT
GCGCTGTGGT TCGGCCGGGC CAAGAACGAG GAACTGGAGC ATCGCAAGAA AGTCGAGGAG
GTGATCGATT TCCTCGAAAT CCAGCACATC CGCAAGACGC CGGTCGGCCG CCTGCCCTAT
GGCCTGCAAA AGCGCGTCGA ACTCGGTCGC GCCCTGGCTG CCGAGCCCTC AATGTTGCTG
CTCGATGAGC CGATGGCCGG CATGAACGTC GAGGAGAAAC AGGACATGTG CCGTTTCATC
CTTGATGTGA ACGACCAGTT CGGCACCACC ATCGTGCTGA TCGAGCACGA CATGGGCGTG
GTGATGGATA TCTCCGACCG CGTCGTCGTG CTCGACTACG GCAAGAAGAT CGGCGATGGC
GTCCCTGACG AAGTTAAGAA CAACGAAGAC GTCATCAAGG CGTACCTCGG TGCTGGCCAT
TAA
 
Protein sequence
MSKKIGDVIL DLQNISLRFG GVKALTDISF NVRQHEIRAI IGPNGAGKSS MLNVINGVYH 
PQEGKIFWHG NERKRMEPHM AAQQNIARTF QNIALFKGMS VLDNIMTGRI TKMKANFIEH
ALWFGRAKNE ELEHRKKVEE VIDFLEIQHI RKTPVGRLPY GLQKRVELGR ALAAEPSMLL
LDEPMAGMNV EEKQDMCRFI LDVNDQFGTT IVLIEHDMGV VMDISDRVVV LDYGKKIGDG
VPDEVKNNED VIKAYLGAGH