Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0249 |
Symbol | |
ID | 3569641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 290673 |
End bp | 292640 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637678687 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_283478 |
Protein GI | 71905891 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 0.463318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACGC AGGCGAATTT CGCCGCGGTG GATGGTTTGC ATACCTTCCC GCGGTTGCTG TTTCATCACG CCCAGACGCG TCCCAATGCC CCGGCCATGC GCGAGAAGTA TCTCGGCATC TGGCAAACGT GGACCTGGCT GGATGTCGCC GAGCGCGTTC GCGCCCTGGC TTGTGGTCTG GCCTCGCTCG GTTTCAAGCG CGGCGACAAT CTGGCCATCA TCGGCGACAA CCGTCCGCAT CTCTACATGA TGATGACCGC TGCCCAGTGT CTGGGTGGCG TACCGGTGCC GCTCTATCAG GACGCCGTGG CCAACGAAAT GCTCTTCGTG CTGCAGGATG CCGGCATCCG CTTCGTGGTC GTCGAAGATC AGGAGCAGGT CGACAAGATG CTGGAAATCC AGGATCAGGT GCCGACGCTG GAGCACATCG TCTATGACGA CCCGCGCGGC ATGCGCCACT ACTCCCAGCC CTTCCTGCAC GATATCCACG AGTTGATGGA GATGGGCCGG ATTCATGACC GCAATCATTC GGACTTCCTG AATGCCGAGG TCGAGCAAGG GCACTTCGAC GACACCTCGG TCATGCTCTA CACCTCGGGT ACCACCGGCA AGCCGAAGGG CGTCTGCCAG ACGCACGCTG CCTTCATCGC CGCTGCCCAA GGCGGGGTGC AGGTCGACAA GCTGGGGCCG GATGGCGACA TCCTGTCCTA CCTGCCCATG GCCTGGGTTG GCGATCACCT GTTCTCCTAC GCCCAGGCGC TGGTGGCAGG TTTCACGATC AACTGCCCGG AATCCGGCGA AACGGTGATG AGCGACCTGC GCGAAATCGG ACCGACCTGC TACTTCGCCC CGCCGCGCGT TTTCGAAAGC CTGCTGACCT CCGTGATGAT CCGCATGGAA GACGCCGGCA AGCTCAAACA GAAAATGTTC CACCACTTCA TGGCGGTGGC CAAGCGCTGT GGCTCGGACA TTCTGGACGG CAAATCGGTC GGCCTCGGCG ACCGCCTGCA GTACTGGCTA GGCAACCTGC TGGTCTACGG CCCGTTGCGC AACGTGCTCG GCATGAGCCG GATCCGCGTG GCCTACACGG CCGGCGCGGC GATTGGTCCG GAACTGTTCC GTTTCTACCG TTCGATGGGC ATCAATCTCA AGCAGTTCTA CGGCCAGACC GAAACCTGTG CCTATGTTTG CCTGCAGCCG GATGGCGCGA TCAAGTTCGA CTCGGTCGGT CAGCCGGCGC CGGGCGTCGA GATCAAGATT GCCGACAACG GCGAGGTGCT GGTCAAGGGG CCGATGCTGC TCAAGGAATA CTACAAGCGC CCGGATGCCA CCGCAGAGAC GATCAACGCT GACGGCTGGT TCATGACCGG CGACGCCGGC TTCCTCGATG AAGACGGCCA CCTGAAGATC ATCGACCGTG CCAAGGACGT CGGCAAGCTG TCGAACGGTG CGATGTTTGC GCCGAACTAC ATCGAAAACA AGCTGAAGTT CTTCCAGCAC ATCAAGGAAG TGGTCTGCTT CGGCCACGAG CGTGACATGG TCTGCGCCTT CGTCAATATC GACGTTGGTG CGGTCGGCAA CTGGGCTGAA CGGCGCGGTA TCGCCTACTC GGGCTATGCC GATCTGGCCG GCAAGCCGGA GGTGCTGGAG CTGATCCGCG AGTGCGTCGA GCAGATCAAC GCCGATCTGG TCAATGACAC GATGGTGGCC GATTCGCAGA TCCATCGTTT CCTGGTCCTG CACAAGGAAC TGGATCCGGA CGATGACGAG CTGACCCGGA CCCGCAAGGT GCGCCGCAAC TTCGTTGCCG AAAAATACAA GGTGCTGATC GACGCGCTCT ATTCGGGCAA GTCCAACCAG TTCATCGAAA CCGAGGTCAA GTTCGAGGAT GGCCGGCGTG GCAAGGTGTC CGCCGACCTG AGGATCATCG ATGCCAAGAC CTTCCCGATC GTGAAAAAGG CTGCCTGA
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Protein sequence | MPTQANFAAV DGLHTFPRLL FHHAQTRPNA PAMREKYLGI WQTWTWLDVA ERVRALACGL ASLGFKRGDN LAIIGDNRPH LYMMMTAAQC LGGVPVPLYQ DAVANEMLFV LQDAGIRFVV VEDQEQVDKM LEIQDQVPTL EHIVYDDPRG MRHYSQPFLH DIHELMEMGR IHDRNHSDFL NAEVEQGHFD DTSVMLYTSG TTGKPKGVCQ THAAFIAAAQ GGVQVDKLGP DGDILSYLPM AWVGDHLFSY AQALVAGFTI NCPESGETVM SDLREIGPTC YFAPPRVFES LLTSVMIRME DAGKLKQKMF HHFMAVAKRC GSDILDGKSV GLGDRLQYWL GNLLVYGPLR NVLGMSRIRV AYTAGAAIGP ELFRFYRSMG INLKQFYGQT ETCAYVCLQP DGAIKFDSVG QPAPGVEIKI ADNGEVLVKG PMLLKEYYKR PDATAETINA DGWFMTGDAG FLDEDGHLKI IDRAKDVGKL SNGAMFAPNY IENKLKFFQH IKEVVCFGHE RDMVCAFVNI DVGAVGNWAE RRGIAYSGYA DLAGKPEVLE LIRECVEQIN ADLVNDTMVA DSQIHRFLVL HKELDPDDDE LTRTRKVRRN FVAEKYKVLI DALYSGKSNQ FIETEVKFED GRRGKVSADL RIIDAKTFPI VKKAA
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