| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0242 |
|---|
| Symbol | |
|---|
| ID | 3569634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 272596 |
|---|
| End bp | 273663 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637678680 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_283471 |
|---|
| Protein GI | 71905884 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCACC GCACGATCGG AAATTCGTCA CCTCGCTCGC AAGCCACTGT CGCAATGGGA
TTTGTGACCG GCATGCTGGC TGGCATAGCG CATCGACAAA TCGACCTGTC GCCACTGCTG
GCGGCACTGG AGATTGATAT TGCAGACACA GCCAGCCGCA TCCCGATCGA CCGCTATGCC
GAGCTCTACA ACCGGCTGAA CCGGCAACTG GACGACGAGG CCTTTGCCCT TTTCGCCCAG
CCGATGCGCG TCGGCAGCTT TGAATTTCTG TGCCGAGGCT GTCTGAGTGC CGCAACGCTG
GCCGATGCGC TGACTCGCGC CGCCCGTTTC CTGCATGTCG TGTTGCCTGA CCTGGCGGTC
AGCGTTCGTC GTTCGCATGG CCATGCCGAA CTGGTCATCG CCGAAACCCG GCGGCTTGCC
GACAATCCGG AAGACCCCGG CCGCATCTTC GCCTTCGAGT GGCTACTCCG CCTGCTGCAT
GGCCTGTCCT GCTGGTTGGC CGGGCGTGGC ATCGGCCTCG ACAGCGTGAT CTTTCCCTAC
CGCAAGCCGG CCCACTTCGG CGACTACGCC CTGATCTTCA CCGAGGACTC ACGCTTCGCG
CCAACCGTGC CAGGCGGCAT GGGCACGCTG GTCGCCAGCT TCAACGCCAA CCTGCTCGAT
CTCCCCATCC GTCGCGACGA GGCGGCGCTG GCCAGCTTTC TCGATGGCGC GCCGGGCAAG
ATCACCATGC TCTACCGGCG CGACCGGGAA ATGGTCATCC GGGTCCGCGA CCTGTTACGC
GCTGCGCTGC CTGAAACCCT GAGCCTGGAC GACATCGCCG ACCGACTGCA CCTGTCGCCA
CGCACCGTCC ACCGCCGGCT GGAAGAAGAA GGATCGAGCT TCCGCGGCAT CAAGGACGCC
CTGCGTCGCG ACATGGCACT GGCCCGCCTG ACCAAGACCC GCGACTCCAT CGCCAAGGTC
GCCGCCGACC TCGGCTACGC GGACACCTCG GCCTTCTATC GCGCCTTCGT CGAATGGACC
GGCATGGCGC CCGTTCGTTA CCGCCGCCAA TGGGCAGCCA AGGGATGA
|
|---|
| Protein sequence | MVHRTIGNSS PRSQATVAMG FVTGMLAGIA HRQIDLSPLL AALEIDIADT ASRIPIDRYA
ELYNRLNRQL DDEAFALFAQ PMRVGSFEFL CRGCLSAATL ADALTRAARF LHVVLPDLAV
SVRRSHGHAE LVIAETRRLA DNPEDPGRIF AFEWLLRLLH GLSCWLAGRG IGLDSVIFPY
RKPAHFGDYA LIFTEDSRFA PTVPGGMGTL VASFNANLLD LPIRRDEAAL ASFLDGAPGK
ITMLYRRDRE MVIRVRDLLR AALPETLSLD DIADRLHLSP RTVHRRLEEE GSSFRGIKDA
LRRDMALARL TKTRDSIAKV AADLGYADTS AFYRAFVEWT GMAPVRYRRQ WAAKG
|
|---|
| |