| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0232 |
|---|
| Symbol | |
|---|
| ID | 3569624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 259943 |
|---|
| End bp | 262159 |
|---|
| Gene Length | 2217 bp |
|---|
| Protein Length | 738 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637678670 |
|---|
| Product | response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal |
|---|
| Protein accession | YP_283461 |
|---|
| Protein GI | 71905874 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGTAT TTCACAGCAA AGCGGAAATG AGCCGGCGGG TCGGCTGGTT TGGCATCGTG
ATCCTGATTG CCATGCTGGC TGCGGTCGCC GTCGCCGTCA AGGCGATGCG CGACCAGGAA
ATCGACGACT GGCGTCAGCA GATGGGCAAT ATGTCGCTGA TCCTTGCCGA GCATACTTCG
CAGACCATTC TGTCGGCCTA TGTCGTGCTC GATTCCGTCA CTGAGCGTGT CCGACAGGCC
AAAGTGACGG ATCAGGCGAG TTTCCGCGCC CGACTGGCGA CGCCCGAAAT GTTTCAGATG
TTGCGTGACC AGATCCGTGG CCTGCCCCAG GTCGATGTCG CATCGATTGT TGCCGCCAAT
GGTGACAACA TCAATTTCAG TCGCGCCTAC CCGATCCCAG CGATCAACCT GGCCGAGCGC
GACTATTTCA AGGCGCACCT GAGCAACCCC GGCCTTGGTG ATTTCATCAG TCAGCCGGTG
CGCAACAAGG GCAACGGCAA GTGGACCTTC TACATCAGCC GCCGGCTCAA TGATGCCAAA
GGGGAGTTTC TCGGACTGGT CCTGGTCGGC ATCTCGGTTG AAGTGTTTAC CAACTTTTAC
CAGCGTGTGG CCCACAACCT GGGCGAGGGC GCCAGCATCA GCCTGTTTCG TGACGATCTG
ACCTTGCTGA CGCGCTGGCC GCACAGGGAT GAGGTAATCG GTACCGTCAA TCGGAGTGGT
ACCGCCTACG ACGTGATCGC GGTACTCAAG CAGGACGAGG GCGTGGTGCT GCGCGATACG
CCACGCTTTT CGACCGGCAA GCGGGAGCTG CGGGTGGCTG CAGTCCGCAA GATTGATCGT
TATCCCCTGG TGCTTGCCAT CGTGGCGACC GATGACCTGT TTCTGGCCGG TTGGCGCCGC
TCGGCCTGGC TGATTGCCGG GGTCAGTCTC GTCGGTGCGA TGAGCTTGCT GATCGTTCTT
CTCATTCTGG TTCGCAACCT GCGGCAACGC GAAGCGGATA TGGCGGAGAT GGAGCAACTG
AAGCTGGCAG CCGAGGCGGC AAACCTGGCC AAGTCCAGTT TTCTGGCCAC CATGAGCCAT
GAAATCCGGA CGCCGATGAA CGGGATACTC GGTATGGCGC AGTTGCTGTT GATGTCCGGA
AGCGCTGAAG ACGAACGTCA CGAATACGTC CGAACCATTC TGAATTCAGG CCAGACGCTG
CTCTCCTTGC TCAACGACAT TCTGGATATC TCCAAGGTCG AGGCCGGCAA GCTTGAATTG
AAGCCGGCCG TCTTCGCGCC GCAGGGAGTC ATCGAGGAAG TCGTCGGGCT GTTTTTCGCC
CAGGCAGAAG CCAAGGGATT AAGTATTACC GCGCAGTGGC ATGGGCCGGC CGTTCAGCGT
TACCGGGCCG ATCAGATTCG CTTGCGCCAG ATATTGACGA ATCTGCTGAG CAACGCCGTC
AAATTTACCA AGGAGGGCGC TATCCGGATC GAAGCGCGCG AAATCGAGCG TGAAGACGGA
TGGGCGAGGC TGGAATTTGC AGTGATCGAC AGCGGAATTG GCATCGCACC GGAGAAACGG
GCCTTGCTGT TCAAACCATT TTCGCAACTG GATAGCTCGG CGACGCGCCA GTACGGCGGT
ACCGGGCTTG GGCTGTCCAT TGTTCGCAGC CTGGCGGAAC TGATGGGGGG CGAGGCCGGC
GTCGAAAGTC AGCCCGGCCA GGGGGCGCGC TTCTGGGTGC GGATCAGGGC CGAGTGTCTG
CATGAAAATG AAGAAAGCCG CAGTATCGAA CGACCTGTCG TGGCGCCGGC ACCTGTCGAA
CCGGCCATCT CGGGGCATGT GCTGGTCGTT GAAGACAATC CGACCAATCG CAAGGTCATC
GAGGCCATGC TCCGGAAATT GCATATCCGG AGCGACAGTG TGGACAACGG GCGAGCGGCA
GTCGATACCC TGGAGCAGGG GATGCGCCCT GATCTGGTGC TGATGGATGT CCAGATGCCG
GTGATGGACG GAATCCAGGC GACGATGCTG ATCCGTCAGC GGGAGGCTGA AACGGGGCTG
CCACGCCTGC CTATCGTTGC CCTGACCGCC GGCGCTTTCG ATGAGGATAG GCAGCACTGC
CTGGTCGCCG GGATGGATGA TTTCATGTCC AAGCCAGTCA ATCTGAATGA CCTGGAAAAG
ATGCTGGGTA AATGGATGGG GTTGCGCGGG GCACCAGCCA CGGTGAGGCC TAGTTAG
|
|---|
| Protein sequence | MGVFHSKAEM SRRVGWFGIV ILIAMLAAVA VAVKAMRDQE IDDWRQQMGN MSLILAEHTS
QTILSAYVVL DSVTERVRQA KVTDQASFRA RLATPEMFQM LRDQIRGLPQ VDVASIVAAN
GDNINFSRAY PIPAINLAER DYFKAHLSNP GLGDFISQPV RNKGNGKWTF YISRRLNDAK
GEFLGLVLVG ISVEVFTNFY QRVAHNLGEG ASISLFRDDL TLLTRWPHRD EVIGTVNRSG
TAYDVIAVLK QDEGVVLRDT PRFSTGKREL RVAAVRKIDR YPLVLAIVAT DDLFLAGWRR
SAWLIAGVSL VGAMSLLIVL LILVRNLRQR EADMAEMEQL KLAAEAANLA KSSFLATMSH
EIRTPMNGIL GMAQLLLMSG SAEDERHEYV RTILNSGQTL LSLLNDILDI SKVEAGKLEL
KPAVFAPQGV IEEVVGLFFA QAEAKGLSIT AQWHGPAVQR YRADQIRLRQ ILTNLLSNAV
KFTKEGAIRI EAREIEREDG WARLEFAVID SGIGIAPEKR ALLFKPFSQL DSSATRQYGG
TGLGLSIVRS LAELMGGEAG VESQPGQGAR FWVRIRAECL HENEESRSIE RPVVAPAPVE
PAISGHVLVV EDNPTNRKVI EAMLRKLHIR SDSVDNGRAA VDTLEQGMRP DLVLMDVQMP
VMDGIQATML IRQREAETGL PRLPIVALTA GAFDEDRQHC LVAGMDDFMS KPVNLNDLEK
MLGKWMGLRG APATVRPS
|
|---|
| |