| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0225 |
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| Symbol | |
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| ID | 3569617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 249268 |
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| End bp | 251289 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637678663 |
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| Product | PAS |
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| Protein accession | YP_283454 |
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| Protein GI | 71905867 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCTTG AAGACGCCTC TTCACCCACC ACACCGCGCC ACGAAATGTT GCAGGCCGGG
CTGGACCTTC TCGACCAGGG CATTACCGTA TTCGATGCCG ATTTGCGGCT GGTCGCCTGG
AACCGCAACT TCCTCAAGCT GCTCGATTTT CCGGAATCGC TGGCCTACAT CGGCGCCCCT
TTCGAGAGCT TTATCCGTTA CAACGCCGAA CGCGGCGAGT ATGGTCCCGG CGATATCGAG
TCCCAGATTA CCGAGCGCGT GGCAGCCGCC CGGAATTTCA CCCCCCACCT CACCGAGCGC
CAGCGTCCGA ATGGCCGGGT CCTGCTGCTG CGCGGCGAAC CCTTGCCGCA CAAGGGGCTG
GTCACCCTGT ACAGCGATAT CACCGAACAA CGCTATATCG AGCACCTGAC CGAACATCAG
AACATGCAGC TCGAGGAGCG CGTGCTCCGG CGTACCGCCC AGCTCGAGAA CGCCAATGCC
AACCTGCGCC TGGCCAACGA AGACAACGTC CGCATTGCCG CCGCACTGGG TCGCAGCGAG
GCCCGCCTGC GGCTGATCAA CGACACCATC CCCATCCTGA TCGGCTACGT GGACCAGCAT
GAGGTTTACC AGTACGCCAA CAAGGGTTAT GCGGACTGGT ATGGCCATCC GGAAGGCGGG
GTCACCGGTC GGGGCGTACT CGATGTGATC GGCCCGCAGG TCTACGCCCA GGTTCGCGAC
TTCGTGCACC GGGCCTTGGC CGGTCAGCAG GTCACTTACG AATACGAGAT GGAACGCCAG
GGCCAGAGCG TTTTTGCCCG CAGCACGCTG GTTCCGGAAA TCAGCAGCGA TGGCGAAACG
CTGGGTTTCT TTGTCTTCTC GCACGAAATC ACCGAACAGA AACGCATGCA GGCCGCGCTG
GTCCAGGCCC AGAAAATGGA AGCCATCGGC CAACTGACCG GCGGCCTGGC CCACGACTTC
AACAACCTGC TGACCGTCAT CATCGGCAAC CTGGCTGCCT TGCAGGATCA CCGGCCGGAC
GATGCCGGCG TCAATGAGTT CGTCGAACCG GCCCTGCAAT CGGCCCGGCG CGGCGTACAG
CTGATCAAGC GCCTGCTCAC CTTCTCGCGT CAACAGCCGC TGGAACCGCA GGCCGTCGAC
ATTGGCCGCC TGATTGGCAG CCTGGCCAAG CTGGTCCGTC GCTCGCTACC AGAATCGATT
GCCGTGTCGA CCGATCTGGC CGGCGCCTCG ATCCATGCCC TGGTTGATCC GGGACAGCTG
GAAAGCGCCC TGCTCAACTT TGCCCTGAAC TCGCGCGATG CCATGCCTGA CGGTGGCCGA
CTGCACATCG CGGCGCGCGC CGTCGAGCTA ACGACCGACG CCACCGCTTT CGATGTCTCG
CCCGGCCATT ACGTGCTGAT CGAAGTCGCC GACAACGGTT GCGGCATGGA TGCCGCCACC
CTCTCCCGTG CCTGCGAACC CTTCTTCACG ACCAAGCGCT TCGGGCTGGG CAGCGGCCTT
GGCCTAGCCA TGGCCTACGG CTTCGCCAAG CAGTCAGGCG GCGGCATTTC GATCCAGAGC
CAGCCCGACC AGGGAACCTC GGTACTGATG GCGCTGCCGC TGGCTGCCCG GGAACCGGAC
ATCGACCTGC CGGGCGAAGA GGCTGCCCTG CCTCACGGCG GCGAGCTGGT CCTGCTCGTC
GAGGATGATC CGAATGTCCG CCGCGTCGTT CGCCAGCAAC TGATCGACCT GGGCCACCCG
GTCATCGAGG CAGAAGATGG CTCCCAGGCG CTCGACATGA TCGATCAGAT CCACGATATC
GCCGTCGTCG TCAGCGATGT AATCATGCCC GGCGGCCTCA ATGGCCGGCA ACTGGCGGAA
CAAACGCTGG CCCGGCGTCC GGAAATGCGC ATCGTGCTGA TGAGCGGTTA TACCGATGAA
GCCGAAACAG ATGGCACCAG TGCGCTGCCC ATTCTCGCCA AACCATTCGA CCGCCAGGAT
CTGGCTCGCG CCCTGCAAAG CGCACACCGA GGCACGCCAT GA
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| Protein sequence | MLLEDASSPT TPRHEMLQAG LDLLDQGITV FDADLRLVAW NRNFLKLLDF PESLAYIGAP
FESFIRYNAE RGEYGPGDIE SQITERVAAA RNFTPHLTER QRPNGRVLLL RGEPLPHKGL
VTLYSDITEQ RYIEHLTEHQ NMQLEERVLR RTAQLENANA NLRLANEDNV RIAAALGRSE
ARLRLINDTI PILIGYVDQH EVYQYANKGY ADWYGHPEGG VTGRGVLDVI GPQVYAQVRD
FVHRALAGQQ VTYEYEMERQ GQSVFARSTL VPEISSDGET LGFFVFSHEI TEQKRMQAAL
VQAQKMEAIG QLTGGLAHDF NNLLTVIIGN LAALQDHRPD DAGVNEFVEP ALQSARRGVQ
LIKRLLTFSR QQPLEPQAVD IGRLIGSLAK LVRRSLPESI AVSTDLAGAS IHALVDPGQL
ESALLNFALN SRDAMPDGGR LHIAARAVEL TTDATAFDVS PGHYVLIEVA DNGCGMDAAT
LSRACEPFFT TKRFGLGSGL GLAMAYGFAK QSGGGISIQS QPDQGTSVLM ALPLAAREPD
IDLPGEEAAL PHGGELVLLV EDDPNVRRVV RQQLIDLGHP VIEAEDGSQA LDMIDQIHDI
AVVVSDVIMP GGLNGRQLAE QTLARRPEMR IVLMSGYTDE AETDGTSALP ILAKPFDRQD
LARALQSAHR GTP
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