Gene Daro_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0215 
SymbolaroK 
ID3569910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp231839 
End bp232357 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content53% 
IMG OID637678653 
Productshikimate kinase 
Protein accessionYP_283444 
Protein GI161377477 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value0.365544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACATC GTCGAAACAT ATATCTTGTC GGTCTGATGG GGGCAGGTAA AACTACTGTC 
GGGCGCCAAC TGGCGAGGCG ACTCTCCCGC CCATTTTTCG ATACCGATCA TGAGATCGTT
GAACGAACGG GCGTGCCGAT CCCGACAATT TTCGAAATTG AGGGGGAAGA GGGATTCCGG
CGCCGAGAAG CGCAGACGAT TTATGATCTT ACGGCCGAGA ATAATATTGT TTTGGCAACT
GGCGGCGGCG TGGTGATCAA CCCTGAGAAT CGTCGGCGAT TGCACGATAC CGGCTGGGTT
GTATATCTGA ATGTATCGCC GGTGTTGTTG TATGAACGTA CACGCCATGA TCGAAACCGC
CCTCTGCTTC GCGTCGAAGA CCCTTTGGCA AAGTTGGAGG AACTTCATTC GATCCGGGAC
CCTCTGTATC GGGAGGTGGC TCACATTGTG GTTGATGGCT CCCATTTGGT TGCCTCGGGC
ATCGTTCAGT ATCTGTTGAG GGAGTTCAAC CGTTTATGA
 
Protein sequence
MEHRRNIYLV GLMGAGKTTV GRQLARRLSR PFFDTDHEIV ERTGVPIPTI FEIEGEEGFR 
RREAQTIYDL TAENNIVLAT GGGVVINPEN RRRLHDTGWV VYLNVSPVLL YERTRHDRNR
PLLRVEDPLA KLEELHSIRD PLYREVAHIV VDGSHLVASG IVQYLLREFN RL