Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0215 |
Symbol | aroK |
ID | 3569910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 231839 |
End bp | 232357 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637678653 |
Product | shikimate kinase |
Protein accession | YP_283444 |
Protein GI | 161377477 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 0.365544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACATC GTCGAAACAT ATATCTTGTC GGTCTGATGG GGGCAGGTAA AACTACTGTC GGGCGCCAAC TGGCGAGGCG ACTCTCCCGC CCATTTTTCG ATACCGATCA TGAGATCGTT GAACGAACGG GCGTGCCGAT CCCGACAATT TTCGAAATTG AGGGGGAAGA GGGATTCCGG CGCCGAGAAG CGCAGACGAT TTATGATCTT ACGGCCGAGA ATAATATTGT TTTGGCAACT GGCGGCGGCG TGGTGATCAA CCCTGAGAAT CGTCGGCGAT TGCACGATAC CGGCTGGGTT GTATATCTGA ATGTATCGCC GGTGTTGTTG TATGAACGTA CACGCCATGA TCGAAACCGC CCTCTGCTTC GCGTCGAAGA CCCTTTGGCA AAGTTGGAGG AACTTCATTC GATCCGGGAC CCTCTGTATC GGGAGGTGGC TCACATTGTG GTTGATGGCT CCCATTTGGT TGCCTCGGGC ATCGTTCAGT ATCTGTTGAG GGAGTTCAAC CGTTTATGA
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Protein sequence | MEHRRNIYLV GLMGAGKTTV GRQLARRLSR PFFDTDHEIV ERTGVPIPTI FEIEGEEGFR RREAQTIYDL TAENNIVLAT GGGVVINPEN RRRLHDTGWV VYLNVSPVLL YERTRHDRNR PLLRVEDPLA KLEELHSIRD PLYREVAHIV VDGSHLVASG IVQYLLREFN RL
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