Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0204 |
Symbol | hslU |
ID | 3569899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 219783 |
End bp | 221123 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637678642 |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_283433 |
Protein GI | 71905846 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 0.337304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGA TGACGCCGCA GGAAATCGTT TCCGAACTCG ACAAGCACAT CGTCGGCCAG AAAAATGCCA AGAAGGCTGT TGCCATTGCC TTGCGTAATC GTTGGCGCCG TTCGCAAGTG GCCGAGCCCT TGCGCCAGGA AATTACGCCG AAGAATATCC TGATGATCGG CCCGACAGGT GTCGGCAAGA CCGAGATTGC TCGCCGCCTG GCCCGTCTGG CCAATGCGCC GTTCATCAAG ATCGAGGCGA CCAAGTTTAC CGAAGTCGGC TACGTCGGTC GTGACGTCGA GACGATCATC CGCGATTTGG TCGAAATGGC CATCAAATCG CATCGCGAAC GGGCCATGAA GGCAATGCGT GCTCGGGCCG AAGACGCGGC CGAGGAGCGC ATTCTCGATG TGTTGCTGCC AACGGTGCGC GGTCCAAACT TTTTTGCCGA GAATTCCGAG TCGACCGCAG CGGAAAACAC GACGCGCCAG AAATTCCGCA AAAAACTGCG CGAAGGCGAA CTGGACGACA AGGAAGTTGA CATTGAAGTG GCTGCGCCAA GTCTCCAGGC CGAGATATTT GCCCCGCCGG GGATGGAAGA GCTGACCCAG CAGATCCAGG GCATGTTTCA AAGCGTCGGC GGCGGCAAGA AAAAGTCACG CAAGCTGTCG ATCAAGGAGG CATTAAAGCT GCTGACCGAC GAGGAAGCTG CCAAGTTGGT CAATGATGAC GACGTCAAGC AGGAGGCGGT CAAGGCGGTC GAGCAGAACG GCATCGTTTT TCTCGACGAG CTGGACAAGA TCGCCAGTCG CTCCGAGATG CACGGCGCCG ATGTTTCGCG CCAAGGCGTG CAGCGCGACT TGCTGCCGCT GGTCGAAGGG ACGACGGTGT CGACCAAGTA CGGGATGATC AAGACCGACC ACATCCTGTT TATTGCCTCC GGTGCCTTCC ACCTATCCAA ACCGTCCGAC CTGATTCCCG AACTGCAGGG CCGCTTTCCG ATTCGGGTCG AGCTGGATTC GCTGTCAGTA GCCGATTTTG AGTGCATCCT GACGCAGACT GATGCCTGTC TGACGCGTCA ATACCAGGCG CTGCTCGAGA CGGAGGGAGT CCAGCTTGAG TTTGTTGAGG ACGGTATCCG GCGTCTCGCT GAAATCGCCT TCCAGGTGAA TGAAAAAACC GAGAACATCG GTGCCCGTCG TCTGCATACG GTCATGGAAA AGCTGCTTGA AGAGGTGTCC TTCGATGCAG GCAAGGTAGG CCTCGACAAG GTTCTGATCG ATGCAGCCTA CGTCAATACC AAGCTGGGCG AACTGGCTGC CGACGAAGAC CTGTCGCGTT ACGTTCTGTA A
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Protein sequence | MTTMTPQEIV SELDKHIVGQ KNAKKAVAIA LRNRWRRSQV AEPLRQEITP KNILMIGPTG VGKTEIARRL ARLANAPFIK IEATKFTEVG YVGRDVETII RDLVEMAIKS HRERAMKAMR ARAEDAAEER ILDVLLPTVR GPNFFAENSE STAAENTTRQ KFRKKLREGE LDDKEVDIEV AAPSLQAEIF APPGMEELTQ QIQGMFQSVG GGKKKSRKLS IKEALKLLTD EEAAKLVNDD DVKQEAVKAV EQNGIVFLDE LDKIASRSEM HGADVSRQGV QRDLLPLVEG TTVSTKYGMI KTDHILFIAS GAFHLSKPSD LIPELQGRFP IRVELDSLSV ADFECILTQT DACLTRQYQA LLETEGVQLE FVEDGIRRLA EIAFQVNEKT ENIGARRLHT VMEKLLEEVS FDAGKVGLDK VLIDAAYVNT KLGELAADED LSRYVL
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